PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028106174.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 332aa    MW: 37751 Da    PI: 6.7854
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028106174.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.81.3e-121256146
             NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwd 46
                    lp+G+r +Ptdeel+++yLk k++g++ ++ +vi+e+d++k+eP++
  XP_028106174.1 12 LPVGYRLRPTDEELINHYLKLKINGNEKQV-SVIREIDVCKCEPSE 56
                    799************************999.99***********75 PP
2NAM112.83.6e-35591731122
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lp G+rF+ tde l+++yLk k++g++ ++ +vi+e+d+yk+        +k +++ew+fF+++d+ky++g+r nrat +gyWkatgkd +++s 
  XP_028106174.1  59 LPFGYRFRRTDEVLINYYLKLKINGDEKQV-SVIQEIDVYKSV-------IKMNDEEWFFFCPKDRKYQNGHRLNRATVAGYWKATGKDSSIKSL 145
                     689************************999.99*******963.......344789************************************997 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWv 122
                      +++++g+kktLvfy grap+g++t+W 
  XP_028106174.1 146 rGTTVIGMKKTLVFYAGRAPNGQRTNWG 173
                     567779*********************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MSLSKILAEE SLPVGYRLRP TDEELINHYL KLKINGNEKQ VSVIREIDVC KCEPSEESLP  60
FGYRFRRTDE VLINYYLKLK INGDEKQVSV IQEIDVYKSV IKMNDEEWFF FCPKDRKYQN  120
GHRLNRATVA GYWKATGKDS SIKSLRGTTV IGMKKTLVFY AGRAPNGQRT NWGETEPRRK  180
TLFPDDGLSD RLMPLGLKYV FQLQDLTKAL AAPDTDHPNG TPSLMNERNA EMVILATATK  240
ETTCTFFLGL DLVPFYLALG SSLTVCYRQQ LSDLARALAA PDTNHLNGTP SHKNYGLSVL  300
QQHVAFFDMD DNGIIYPWET YTDETVGQGL WP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.19e-52NAC family protein