PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028106015.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 1060aa MW: 118075 Da PI: 7.0954

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028106015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	48.2	2.1e-15	525	571	4	50
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 ei led+ + +++i+dAAk+L v+ ++LKr+CR++GI+RW + i+ XP_028106015.1 525 EIFLEDILQTSQMTIEDAAKSLHVSISTLKRACRKFGIPRWSRHHIN 571 68899************************************877776 PP
2	RWP-RK	52.9	7.2e-17	663	703	12	52
RWP-RK 12 kyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + +++++dAA++L v+ ++LKr+CR++GI+RWP R i+++ XP_028106015.1 663 QASEMSLNDAANSLHVSISTLKRACRKLGISRWPPRHINKI 703 66689*********************************996 PP
3	RWP-RK	39.1	1.5e-12	884	924	5	45
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 i +edl + +++++dAA L+v+ ++LKr CR yGI+ WP XP_028106015.1 884 IPIEDLLQASEMSLNDAACRLNVSKSALKRVCRGYGIEKWP 924 67899999********************************* PP

Sequence ? help Back to Top
Protein Sequence Length: 1060 aa Download sequence
MMLPPHGAGG IHEGGGRGDR DLETEIKSWQ PEGRNSGVFW TPEDEDDQPL SLAADNLDLI 60 PKCPTAKWKL KDEIRCVVGN VFNSSRIDAL LVQYWAPITT DGKAILTTQN QPFALSKIYK 120 GLCWYRMISK DYKFYVDGET TEQQLGLPGR VFKHQLVESS PNVEYYSNKE YPQRKHALRC 180 QIRATLALPV FEPTDHTCVG VLELLFTTRD AFLIFLEEGC AYDAFLGLDL KCLNLWEHPF 240 MEIQDKNEAA LRDEILDVLK LVLEVHELPL AQIWRTCRVC RSLLKNGVFG LSRQRGLSSL 300 MEENGDIFFR ACGHHHFRKG MGVVGTALKS LNLVFCADVT QFSITEYPMT HYAREFGLSG 360 CGCFSVCLWS SNPGDDKVGG NVMTSLMKEI LGTMRKKIQS FKLASGEELG EELIVEVIDF 420 QYGEKKIQTL KLSSGEELGE EFSEVTDFHN GEKLNSVQIS QTRPEPLQKQ GDMMQLNSSD 480 QQSMDAINNE SNVISVERSN STCSQGKGTR KKLKRKQNKT GGKIEIFLED ILQTSQMTIE 540 DAAKSLHVSI STLKRACRKF GIPRWSRHHI NQLNKNGGNS VQISPTTGSL PRLEPLQKQG 600 DMMQLNSSDQ QSMDAINITN VVGAEQSNIA VTCSQEKYAI KRSERERIKT GIRIESPPEG 660 ILQASEMSLN DAANSLHVSI STLKRACRKL GISRWPPRHI NKINKNGGSS VQISPTTGSL 720 PRSEPLKNEG DMMQLDSSDQ QSRDATKSGG AVICSQEKGT MKMPYREDKK TGVRSAMPSE 780 HILQTSKESL EGAAEHHGAS QFAFKSAGSR KITRSLPRPG PLQNGDDQMM QLDSSDQQSM 840 DALNITNVVS AEQSNIAVTC SHEKDAIIKR SEREHKKTGV KIAIPIEDLL QASEMSLNDA 900 ACRLNVSKSA LKRVCRGYGI EKWPPSKRPK FSCSQLFDEK QIQKLDPDLS SNQAGNIVTL 960 TKPHDTATKD AEIVTIKAKY GNDIVIKFPL SSSSGLVELW QEVARRLNLD PETYHIKYKD 1020 EDGDLILIAC DDDLLGFITS SRTLGNTTIL LLLEPRLPIT

Sequence ? help Back to Top

Protein Sequence Length: 1060 aa Download sequence

MMLPPHGAGG IHEGGGRGDR DLETEIKSWQ PEGRNSGVFW TPEDEDDQPL SLAADNLDLI  60
PKCPTAKWKL KDEIRCVVGN VFNSSRIDAL LVQYWAPITT DGKAILTTQN QPFALSKIYK  120
GLCWYRMISK DYKFYVDGET TEQQLGLPGR VFKHQLVESS PNVEYYSNKE YPQRKHALRC  180
QIRATLALPV FEPTDHTCVG VLELLFTTRD AFLIFLEEGC AYDAFLGLDL KCLNLWEHPF  240
MEIQDKNEAA LRDEILDVLK LVLEVHELPL AQIWRTCRVC RSLLKNGVFG LSRQRGLSSL  300
MEENGDIFFR ACGHHHFRKG MGVVGTALKS LNLVFCADVT QFSITEYPMT HYAREFGLSG  360
CGCFSVCLWS SNPGDDKVGG NVMTSLMKEI LGTMRKKIQS FKLASGEELG EELIVEVIDF  420
QYGEKKIQTL KLSSGEELGE EFSEVTDFHN GEKLNSVQIS QTRPEPLQKQ GDMMQLNSSD  480
QQSMDAINNE SNVISVERSN STCSQGKGTR KKLKRKQNKT GGKIEIFLED ILQTSQMTIE  540
DAAKSLHVSI STLKRACRKF GIPRWSRHHI NQLNKNGGNS VQISPTTGSL PRLEPLQKQG  600
DMMQLNSSDQ QSMDAINITN VVGAEQSNIA VTCSQEKYAI KRSERERIKT GIRIESPPEG  660
ILQASEMSLN DAANSLHVSI STLKRACRKL GISRWPPRHI NKINKNGGSS VQISPTTGSL  720
PRSEPLKNEG DMMQLDSSDQ QSRDATKSGG AVICSQEKGT MKMPYREDKK TGVRSAMPSE  780
HILQTSKESL EGAAEHHGAS QFAFKSAGSR KITRSLPRPG PLQNGDDQMM QLDSSDQQSM  840
DALNITNVVS AEQSNIAVTC SHEKDAIIKR SEREHKKTGV KIAIPIEDLL QASEMSLNDA  900
ACRLNVSKSA LKRVCRGYGI EKWPPSKRPK FSCSQLFDEK QIQKLDPDLS SNQAGNIVTL  960
TKPHDTATKD AEIVTIKAKY GNDIVIKFPL SSSSGLVELW QEVARRLNLD PETYHIKYKD  1020
EDGDLILIAC DDDLLGFITS SRTLGNTTIL LLLEPRLPIT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	510	517	RKKLKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	6e-74	Nin-like family protein