PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028106014.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 1166aa MW: 130052 Da PI: 7.1537

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028106014.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	48	2.4e-15	525	571	4	50
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 ei led+ + +++i+dAAk+L v+ ++LKr+CR++GI+RW + i+ XP_028106014.1 525 EIFLEDILQTSQMTIEDAAKSLHVSISTLKRACRKFGIPRWSRHHIN 571 68899************************************877776 PP
2	RWP-RK	39.2	1.4e-12	663	702	12	51
RWP-RK 12 kyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 + +++++dAA++L v+ ++LKr CR y I+ WP ki++ XP_028106014.1 663 QASEMSLNDAANSLHVSKSALKRVCRDYDIQKWPPSKITK 702 66689******************************99987 PP
3	RWP-RK	57.3	3.1e-18	769	818	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + i++ed+ + ++ i+dAA++L v+ ++LKr+CR++GI+RWP R i+++ XP_028106014.1 769 NAIHIEDILQTSEMRIQDAANSLHVSISTLKRACRKLGISRWPPRHINKI 818 57999******************************************996 PP
4	RWP-RK	38.9	1.7e-12	990	1030	5	45
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 i +edl + +++++dAA L+v+ ++LKr CR yGI+ WP XP_028106014.1 990 IPIEDLLQASEMSLNDAACRLNVSKSALKRVCRGYGIEKWP 1030 67899999********************************* PP

Sequence ? help Back to Top
Protein Sequence Length: 1166 aa Download sequence
MMLPPHGAGG IHEGGGRGDR DLETEIKSWQ PEGRNSGVFW TPEDEDDQPL SLAADNLDLI 60 PKCPTAKWKL KDEIRCVVGN VFNSSRIDAL LVQYWAPITT DGKAILTTQN QPFALSKIYK 120 GLCWYRMISK DYKFYVDGET TEQQLGLPGR VFKHQLVESS PNVEYYSNKE YPQRKHALRC 180 QIRATLALPV FEPTDHTCVG VLELLFTTRD AFLIFLEEGC AYDAFLGLDL KCLNLWEHPF 240 MEIQDKNEAA LRDEILDVLK LVLEVHELPL AQIWRTCRVC RSLLKNGVFG LSRQRGLSSL 300 MEENGDIFFR ACGHHHFRKG MGVVGTALKS LNLVFCADVT QFSITEYPMT HYAREFGLSG 360 CGCFSVCLWS SNPGDDKVGG NVMTSLMKEI LGTMRKKIQS FKLASGEELG EELIVEVIDF 420 QYGEKKIQTL KLSSGEELGE EFSEVTDFHN GEKLNSVQIS QTRPEPLQKQ GDMMQLNSSD 480 QQSMDAINNE SNVISVERSN STCSQGKGTR KKLKRKQNKT GGKIEIFLED ILQTSQMTIE 540 DAAKSLHVSI STLKRACRKF GIPRWSRHHI NQLNKNGGNS VQISPTTGSL PRLEPLQKQG 600 DMMQLNSSDQ QSMDAINITN VVGAEQSNIA VTCSQEKYAI KRSERERIKT GIRIESPPEG 660 ILQASEMSLN DAANSLHVSK SALKRVCRDY DIQKWPPSKI TKFSVGSLPT GSLPRLEPLQ 720 NEGDMMQHQQ SMDAINIGAE QSNIGVTCSQ EKYAIKRSER EHKNTGVRNA IHIEDILQTS 780 EMRIQDAANS LHVSISTLKR ACRKLGISRW PPRHINKINK NGGSSVQISP TTGSLPRSEP 840 LKNEGDMMQL DSSDQQSRDA TKSGGAVICS QEKGTMKMPY REDKKTGVRS AMPSEHILQT 900 SKESLEGAAE HHGGSRKITR SLPRPGPLQN GDDQMMQLDS SDQQSMDALN ITNVVSAEQS 960 NIAVTCSHEK DAIIKRSERE HKKTGVKIAI PIEDLLQASE MSLNDAACRL NVSKSALKRV 1020 CRGYGIEKWP PSKRPKFSCS QLFDEKQIQK LDPDLSSNQA GNIVTLTKPH DTATKDAEIV 1080 TIKAKYGNDI VIKFPLSSSS GLVELWQEVA RRLNLDPETY HIKYKDEDGD LILIACDDDL 1140 LGFITSSRTL GNTTILLLLE PRLPIT

Sequence ? help Back to Top

Protein Sequence Length: 1166 aa Download sequence

MMLPPHGAGG IHEGGGRGDR DLETEIKSWQ PEGRNSGVFW TPEDEDDQPL SLAADNLDLI  60
PKCPTAKWKL KDEIRCVVGN VFNSSRIDAL LVQYWAPITT DGKAILTTQN QPFALSKIYK  120
GLCWYRMISK DYKFYVDGET TEQQLGLPGR VFKHQLVESS PNVEYYSNKE YPQRKHALRC  180
QIRATLALPV FEPTDHTCVG VLELLFTTRD AFLIFLEEGC AYDAFLGLDL KCLNLWEHPF  240
MEIQDKNEAA LRDEILDVLK LVLEVHELPL AQIWRTCRVC RSLLKNGVFG LSRQRGLSSL  300
MEENGDIFFR ACGHHHFRKG MGVVGTALKS LNLVFCADVT QFSITEYPMT HYAREFGLSG  360
CGCFSVCLWS SNPGDDKVGG NVMTSLMKEI LGTMRKKIQS FKLASGEELG EELIVEVIDF  420
QYGEKKIQTL KLSSGEELGE EFSEVTDFHN GEKLNSVQIS QTRPEPLQKQ GDMMQLNSSD  480
QQSMDAINNE SNVISVERSN STCSQGKGTR KKLKRKQNKT GGKIEIFLED ILQTSQMTIE  540
DAAKSLHVSI STLKRACRKF GIPRWSRHHI NQLNKNGGNS VQISPTTGSL PRLEPLQKQG  600
DMMQLNSSDQ QSMDAINITN VVGAEQSNIA VTCSQEKYAI KRSERERIKT GIRIESPPEG  660
ILQASEMSLN DAANSLHVSK SALKRVCRDY DIQKWPPSKI TKFSVGSLPT GSLPRLEPLQ  720
NEGDMMQHQQ SMDAINIGAE QSNIGVTCSQ EKYAIKRSER EHKNTGVRNA IHIEDILQTS  780
EMRIQDAANS LHVSISTLKR ACRKLGISRW PPRHINKINK NGGSSVQISP TTGSLPRSEP  840
LKNEGDMMQL DSSDQQSRDA TKSGGAVICS QEKGTMKMPY REDKKTGVRS AMPSEHILQT  900
SKESLEGAAE HHGGSRKITR SLPRPGPLQN GDDQMMQLDS SDQQSMDALN ITNVVSAEQS  960
NIAVTCSHEK DAIIKRSERE HKKTGVKIAI PIEDLLQASE MSLNDAACRL NVSKSALKRV  1020
CRGYGIEKWP PSKRPKFSCS QLFDEKQIQK LDPDLSSNQA GNIVTLTKPH DTATKDAEIV  1080
TIKAKYGNDI VIKFPLSSSS GLVELWQEVA RRLNLDPETY HIKYKDEDGD LILIACDDDL  1140
LGFITSSRTL GNTTILLLLE PRLPIT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	510	517	RKKLKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	2e-73	Nin-like family protein