PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028105891.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 845aa MW: 96503.6 Da PI: 8.0122

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028105891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.1	1.2e-17	31	100	1	72
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 +fYn+Y+ ++GFs+r+ + +k+ ++g+it+r fvC+keg+r +k++ ++++r+e rtgC+a+l +k ++ XP_028105891.1 31 NFYNAYGGRMGFSIRRGYVNKN-KEGQITSRLFVCNKEGFRGIDKRD-PLTKNPRQEVRTGCQARLIIKWDR 100 6******************9.6677*************999.999***************9775 PP

Sequence ? help Back to Top
Protein Sequence Length: 845 aa Download sequence
MEPNNVENDE GDCDWKPRVH MTFDTEQEAY NFYNAYGGRM GFSIRRGYVN KNKEGQITSR 60 LFVCNKEGFR GIDKRDPLTK NPRQEVRTGC QARLIIKWDR NIHKFFAAEI DLAEKSGIRL 120 NAAFELMGNE AGGRESLGFT KVDQKNYLRT KRQKSLAYGE AGSILQYFRE KTLENPSFFY 180 SVQLDSEEQI TNIFWADAQM IMDYGQFGDV VTFDTTYKLN SAHRPFASFV GFNHHRKTVI 240 FGAALMYDET ADSFIWLFRR FLEAMSSKAL KTIFTDQDAA MAKAIPIVMP NTKHRLCTWH 300 LMQNALKHAN TIFNDKEHAN SIFKDKEVRD KGMKSVLSKF MYAIEDKDDF TLKWEEMLDK 360 YEVQDNHWLK LTFGVKEKWG WPYVRNAWGA GMSSTQLSES FNAFLKDFIQ SDHNLMQFFM 420 HFDRVLCEKR YKELQAEYAL CQKLPRVKIK VKIMEQAADV YTNKIYEEFQ DEYIKSLEVN 480 IEETEICGES TIYTVLDSDG VKVRKVTVEC DGSLTCNCRK FEMKGILCSH CLKILRESLK 540 FKEIPSQYIL KRWTKKARAE NVKDRCGHDI KVDVRLHQTS RFRSLMAIFR AVACRASESE 600 ETYNLTVEKA DDLIANIESM LNAKFNMPFS DTIEHESPPD TCLESFEVDG VVDTNVVQAK 660 GLKRKECTSK GRRRTKGGLE LALAKKIKTS LHNASQTPMF VAPQPSSHNA SQTPMSVAPQ 720 PPPLFSTSAP EPSPSFSPSI PQSAPLFSIS APQLPPFSTC VPQVNASSTQ FMYPAYDPSY 780 LRHNMHFSMP SMYSVHGSYQ ALLNNASGYD SQASNSPAYS EVLYGHGRGR GRGEGHGNVD 840 HTSIS

Sequence ? help Back to Top

Protein Sequence Length: 845 aa Download sequence

MEPNNVENDE GDCDWKPRVH MTFDTEQEAY NFYNAYGGRM GFSIRRGYVN KNKEGQITSR  60
LFVCNKEGFR GIDKRDPLTK NPRQEVRTGC QARLIIKWDR NIHKFFAAEI DLAEKSGIRL  120
NAAFELMGNE AGGRESLGFT KVDQKNYLRT KRQKSLAYGE AGSILQYFRE KTLENPSFFY  180
SVQLDSEEQI TNIFWADAQM IMDYGQFGDV VTFDTTYKLN SAHRPFASFV GFNHHRKTVI  240
FGAALMYDET ADSFIWLFRR FLEAMSSKAL KTIFTDQDAA MAKAIPIVMP NTKHRLCTWH  300
LMQNALKHAN TIFNDKEHAN SIFKDKEVRD KGMKSVLSKF MYAIEDKDDF TLKWEEMLDK  360
YEVQDNHWLK LTFGVKEKWG WPYVRNAWGA GMSSTQLSES FNAFLKDFIQ SDHNLMQFFM  420
HFDRVLCEKR YKELQAEYAL CQKLPRVKIK VKIMEQAADV YTNKIYEEFQ DEYIKSLEVN  480
IEETEICGES TIYTVLDSDG VKVRKVTVEC DGSLTCNCRK FEMKGILCSH CLKILRESLK  540
FKEIPSQYIL KRWTKKARAE NVKDRCGHDI KVDVRLHQTS RFRSLMAIFR AVACRASESE  600
ETYNLTVEKA DDLIANIESM LNAKFNMPFS DTIEHESPPD TCLESFEVDG VVDTNVVQAK  660
GLKRKECTSK GRRRTKGGLE LALAKKIKTS LHNASQTPMF VAPQPSSHNA SQTPMSVAPQ  720
PPPLFSTSAP EPSPSFSPSI PQSAPLFSIS APQLPPFSTC VPQVNASSTQ FMYPAYDPSY  780
LRHNMHFSMP SMYSVHGSYQ ALLNNASGYD SQASNSPAYS EVLYGHGRGR GRGEGHGNVD  840
HTSIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein