PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028105682.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 475aa MW: 55666.8 Da PI: 6.3296

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028105682.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.9	8.2e-19	70	158	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 +fYn+YAk GFs+r+++s+k +n +++r++v skeg+++++ + +e++r++++ tr+gC+a++++k ++ ++k+ev+++ +eHn + XP_028105682.1 70 RFYNSYAKVKGFSIRRDQSYKD-KNSMVISRNWVYSKEGHKQSKYLEvEERKREPKQLTRVGCRACFRIKYNRnTSKYEVNEFFKEHNDS 158 5******************9.55569**********9998867888899************9999***********65 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MEDNTEQNKN NIIYELDDDD GNDGEHNIHN EDDIVNSNDI PTKRDIKRLD ELTERDVFEM 60 TFDSEENGER FYNSYAKVKG FSIRRDQSYK DKNSMVISRN WVYSKEGHKQ SKYLEVEERK 120 REPKQLTRVG CRACFRIKYN RNTSKYEVNE FFKEHNDSMI GPLGVQFLRS HQNITSANKA 180 QGNAMHHIGM RTSHIMDFVA QQAGGYENVG FIPKDMFNHF GTERKAQVVD GDAESALAYL 240 CGKEEQDPMF YYKYDVDEEN RLNNLFWTDS GSRTDYLCFG DVLMFDTTYR TNAYNKPFVI 300 LQGVTNHFQM TVFECALLAS ETVETYIWVL EKFLNAMDHK MPLSAIIDGD ETMRKAIKTV 360 MPTARHRLCK WHLKMNALSN IHMEGFLHGF EKCMSMQCTQ EMFELECKNL VDKYGLHNNM 420 WIADVYCKRT LWAEAYLHGY FFAGAKSTQR CDSMNSILNN RKNLFNHLIF QLVKF

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MEDNTEQNKN NIIYELDDDD GNDGEHNIHN EDDIVNSNDI PTKRDIKRLD ELTERDVFEM  60
TFDSEENGER FYNSYAKVKG FSIRRDQSYK DKNSMVISRN WVYSKEGHKQ SKYLEVEERK  120
REPKQLTRVG CRACFRIKYN RNTSKYEVNE FFKEHNDSMI GPLGVQFLRS HQNITSANKA  180
QGNAMHHIGM RTSHIMDFVA QQAGGYENVG FIPKDMFNHF GTERKAQVVD GDAESALAYL  240
CGKEEQDPMF YYKYDVDEEN RLNNLFWTDS GSRTDYLCFG DVLMFDTTYR TNAYNKPFVI  300
LQGVTNHFQM TVFECALLAS ETVETYIWVL EKFLNAMDHK MPLSAIIDGD ETMRKAIKTV  360
MPTARHRLCK WHLKMNALSN IHMEGFLHGF EKCMSMQCTQ EMFELECKNL VDKYGLHNNM  420
WIADVYCKRT LWAEAYLHGY FFAGAKSTQR CDSMNSILNN RKNLFNHLIF QLVKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-79	FAR1 family protein