PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028105069.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 290aa    MW: 33794 Da    PI: 5.4519
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028105069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR157.83.5e-1831100172
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 
                     +fYn+Y+ ++GFs+r+ + +k+ ++g+it+r fvC+keg++  +k++   ++++r+e rtgC+a+l +k ++
  XP_028105069.1  31 NFYNAYGGMMGFSIRRGYVNKN-KEGQITSRLFVCNKEGFQGIDKRD-PLTKNPRQEVRTGCQAQLIIKWDR 100
                     6********************9.6677*****************999.999*****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEPNNVENDE GDCDWKPRVH MTFDIEQEAY NFYNAYGGMM GFSIRRGYVN KNKEGQITSR  60
LFVCNKEGFQ GIDKRDPLTK NPRQEVRTGC QAQLIIKWDR NIHKFFVEYT YMLPSQRKIS  120
ASQATEIDLA EKSGIQLNTA FELVGNEAGG RESLGFTKVD QKNYLRAKRR KSLAYGEAGS  180
ILQYFREKTL ENPSFFYSVQ LDSEEQITNI FWADAQMIMD YGQFGDVVTF DTTYKLNSAH  240
RPFASFVGFN HHREIVIFGA TLMYDETADS FIWLLEDSWR QFLNQLLYFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-56FAR1 family protein