PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028105065.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 222aa MW: 25474.1 Da PI: 9.94 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.4 | 3.3e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev v++fsstgkly++ss XP_028105065.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVMVFSSTGKLYDFSS 59 8***********************************************96 PP | |||||||
2 | K-box | 90.6 | 2.8e-30 | 82 | 170 | 10 | 98 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ + +q+e+a L+++++nLq+++R+++Ge+L+ L++keLq+Le+qLe slk +R kK+++l+++i+el +k + +++en +L kk+ XP_028105065.1 82 PCSEVKFWQREAAMLRQQLQNLQENHRQMMGEELSGLNVKELQNLENQLEMSLKGVRMKKDQILVDEIQELNRKGNLIHQENVELYKKV 170 446789*******************************************************************************9996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVMVFSS TGKLYDFSSS 60 SMKTIIERYN KSKVEHNQLA NPCSEVKFWQ REAAMLRQQL QNLQENHRQM MGEELSGLNV 120 KELQNLENQL EMSLKGVRMK KDQILVDEIQ ELNRKGNLIH QENVELYKKV YGTRDVNGAN 180 RNALLSNSLS LGDDSHAPVH LQLCQPQQQN YEPPSRGRLQ LH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 2e-98 | MIKC_MADS family protein |