PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028104929.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 378aa MW: 43299.1 Da PI: 6.5132

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028104929.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	3.1e-09	305	340	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_028104929.1 305 YKWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 340 4679*****************************885 PP
2	ELK	37.8	3.9e-13	260	281	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sLkqE+s XP_028104929.1 260 ELKNHLLRKYSGYLSSLKQELS 281 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MEDYSQLSDN TAPRASFLYG GPVLAPSASV YGRTNSGSNV SNHHQTQMGM NSFHLQSGGC 60 YQSESQSHPI VKTESGTSQH VQKFHYPSII RGHQTVHHQQ DHNNQQGNEN SNDVDSIKAK 120 IVAHPQYSNL LEAYMDCQKV GAPPEVVARL TAVRQEFEAR QRASATCRDG SKDPELDQFM 180 EAYYDMLVKY REELTRPLQE AMEFMRRTEA QLNLLNNGPV RIFNSEEKCE GVGSSEEEDQ 240 DNSGGETELP EIDPRAEDRE LKNHLLRKYS GYLSSLKQEL SKKKKKGKLP KEARQKLLNW 300 WELHYKWPYP SETEKVALAE STGLDQKQIN NWFINQRKRH WKPSEDMQFM VMDGIHPQNA 360 AFYMEGHYMG EGPYRLGP

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MEDYSQLSDN TAPRASFLYG GPVLAPSASV YGRTNSGSNV SNHHQTQMGM NSFHLQSGGC  60
YQSESQSHPI VKTESGTSQH VQKFHYPSII RGHQTVHHQQ DHNNQQGNEN SNDVDSIKAK  120
IVAHPQYSNL LEAYMDCQKV GAPPEVVARL TAVRQEFEAR QRASATCRDG SKDPELDQFM  180
EAYYDMLVKY REELTRPLQE AMEFMRRTEA QLNLLNNGPV RIFNSEEKCE GVGSSEEEDQ  240
DNSGGETELP EIDPRAEDRE LKNHLLRKYS GYLSSLKQEL SKKKKKGKLP KEARQKLLNW  300
WELHYKWPYP SETEKVALAE STGLDQKQIN NWFINQRKRH WKPSEDMQFM VMDGIHPQNA  360
AFYMEGHYMG EGPYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-143	TALE family protein