PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028104917.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 129aa    MW: 14197.1 Da    PI: 4.5475
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028104917.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.93e-101155345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +W+ e d  + +a + ++ +    W++Ia+ ++ g++l+++k+++ 
   XP_028104917.1 11 AWSREQDRAFENALATYPEDsadWWEKIAADVP-GKSLEEIKHHYE 55
                     8*********************9**********.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MKAEETGDSS AWSREQDRAF ENALATYPED SADWWEKIAA DVPGKSLEEI KHHYELLVDD  60
INNIESGCVP LPCYNSSSDG STSHAGDEGT GKKGGHFGNF NGDSNHGGKA SRSDQERRKG  120
IAWTEEEHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.12e-42MYB family protein