PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028104377.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 507aa MW: 58696.3 Da PI: 6.4616

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028104377.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.6	8.9e-23	126	215	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++ F++r+++ +k k +++ ++r +vC+keg+r+ +k++ ++++rae+rtgC+a+l +k+++ +gk++vt+++++H H+l+ XP_028104377.1 126 DFYNTYGGRMRFNIRRDYCRKDKFTNQLICRLLVCNKEGFRKVDKRD-PLSKNPRAESRTGCEARLYIKLDEgTGKFVVTDFREKHKHDLV 215 6*****************************************999.999************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MASDSVDDIN VGVALSTALL LPGDLERNAE YSEYENYALM LQHSVQHSPP SNPFSSSPAN 60 PSSPTANSTA PVSMLRELHR DDHHRLSKDL FNTNQLHFDI DMEPENDCDW KPKQGMTFDS 120 EQCTYDFYNT YGGRMRFNIR RDYCRKDKFT NQLICRLLVC NKEGFRKVDK RDPLSKNPRA 180 ESRTGCEARL YIKLDEGTGK FVVTDFREKH KHDLVSPECA HMLPSQRKIS TTQAIQLDLA 240 AQSGLRFGQS FELMGREAGG RQCLGFTKLD SKNYLRTKRQ QSLAYGEVGN VLQYFKEKSL 300 QNPSFFYAFQ LDNDEQITNM FWADAQMIMD YAQFCDVVTF DMTYKLNEEH RPFASFMGFN 360 HHRETVIFGA ALLYDETAES FVWLFENFLE AMSRKAPKTL FTDQDAAMAK AIPIAMPDTS 420 HRLCTWHLMQ NALKHVNCLF QDKGVKSVLN KFFFHIEDAN QWKLEWAEML DKYDANENHW 480 LKLTFAVKEK WGWPYVRSTW DAGMSTT

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MASDSVDDIN VGVALSTALL LPGDLERNAE YSEYENYALM LQHSVQHSPP SNPFSSSPAN  60
PSSPTANSTA PVSMLRELHR DDHHRLSKDL FNTNQLHFDI DMEPENDCDW KPKQGMTFDS  120
EQCTYDFYNT YGGRMRFNIR RDYCRKDKFT NQLICRLLVC NKEGFRKVDK RDPLSKNPRA  180
ESRTGCEARL YIKLDEGTGK FVVTDFREKH KHDLVSPECA HMLPSQRKIS TTQAIQLDLA  240
AQSGLRFGQS FELMGREAGG RQCLGFTKLD SKNYLRTKRQ QSLAYGEVGN VLQYFKEKSL  300
QNPSFFYAFQ LDNDEQITNM FWADAQMIMD YAQFCDVVTF DMTYKLNEEH RPFASFMGFN  360
HHRETVIFGA ALLYDETAES FVWLFENFLE AMSRKAPKTL FTDQDAAMAK AIPIAMPDTS  420
HRLCTWHLMQ NALKHVNCLF QDKGVKSVLN KFFFHIEDAN QWKLEWAEML DKYDANENHW  480
LKLTFAVKEK WGWPYVRSTW DAGMSTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-82	FAR1 family protein