PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028104356.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 173aa MW: 19821.2 Da PI: 6.2887

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028104356.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.2	2.8e-08	122	155	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + XP_028104356.1 122 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 155 469*****************************87 PP
2	ELK	30.4	8.6e-11	76	97	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ XP_028104356.1 76 ELKHELKQGYKEKIVDIREEIL 97 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MEAVMACWEI EQSLQSLTGV SPGEGTGATM SDDDDDQVDS DTNLFDGSLE GADILGFGPL 60 VPTESERSLM ERVRQELKHE LKQGYKEKIV DIREEILRKR RAGKLPGDTT SMLKAWWQSH 120 SKWPYPTEED KARLVQETGL QLKQINNWFI NQRKRNWHSN SSTSTVLKSK RKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	153	173	RKRNWHSNSSTSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-107	TALE family protein