PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028104337.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 554aa MW: 62485.2 Da PI: 6.7497

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028104337.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	39.6	1e-12	382	426	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 ei l+d+ ++ +++i++AA +L+v+ ++LKr CR yG + WP Rk XP_028104337.1 382 EIPLDDILQNSKKSIQAAADDLKVSRSTLKRVCRGYGFPGWPPRK 426 688999**************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MISMDYKFYM DRESSDEQLG VPGRAFKQGF PEFSPNVEYY SIKEYPLRDH ALLCQFKHCG 60 AIPVFDPSTH LCVGVLEIVS TAPCSIDFVD LHNYLEEVGL ESSISHADHT TDFNVRHRGA 120 LDEINKVLKV VREDHGLLLA QAWAPCGVDC TCRALVKGDI FHVIHNFNNR FEYCQFLAVN 180 SLSGFRKWQG VVGRAFSSPN VLLCKDVTQL SIIDYPLAHY ARYHKLGCCF AICLQSSFTG 240 NDIYVLECFM PPSNKDYYGN QQTALRKILE TMKKNFHSFK LASGEELGGH LYIEEIPFQN 300 GEKLDSVQMS QTTKSLPMLE PLQSGREMIQ LDLSNQQSMD ALNNESNVVS AERSNIDVTC 360 SQEKGKTKRP KRVHNKTGVK IEIPLDDILQ NSKKSIQAAA DDLKVSRSTL KRVCRGYGFP 420 GWPPRKKNMV GQSQPSESSR GVDHQQISQL SFDLPTVVHA NPHNIAIEDA NIVTMRAKYI 480 NDITIKFRLS LSSSLVELQQ QIAKRLHLEA GSYYVKYKDE EDHAILIACD DDLQDCISTY 540 RLLGTSIVVL IDPK

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MISMDYKFYM DRESSDEQLG VPGRAFKQGF PEFSPNVEYY SIKEYPLRDH ALLCQFKHCG  60
AIPVFDPSTH LCVGVLEIVS TAPCSIDFVD LHNYLEEVGL ESSISHADHT TDFNVRHRGA  120
LDEINKVLKV VREDHGLLLA QAWAPCGVDC TCRALVKGDI FHVIHNFNNR FEYCQFLAVN  180
SLSGFRKWQG VVGRAFSSPN VLLCKDVTQL SIIDYPLAHY ARYHKLGCCF AICLQSSFTG  240
NDIYVLECFM PPSNKDYYGN QQTALRKILE TMKKNFHSFK LASGEELGGH LYIEEIPFQN  300
GEKLDSVQMS QTTKSLPMLE PLQSGREMIQ LDLSNQQSMD ALNNESNVVS AERSNIDVTC  360
SQEKGKTKRP KRVHNKTGVK IEIPLDDILQ NSKKSIQAAA DDLKVSRSTL KRVCRGYGFP  420
GWPPRKKNMV GQSQPSESSR GVDHQQISQL SFDLPTVVHA NPHNIAIEDA NIVTMRAKYI  480
NDITIKFRLS LSSSLVELQQ QIAKRLHLEA GSYYVKYKDE EDHAILIACD DDLQDCISTY  540
RLLGTSIVVL IDPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-68	Nin-like family protein