PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028104280.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 343aa MW: 40241.9 Da PI: 6.0531

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028104280.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.9	2.8e-55	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhP+deelv++yL+kk++ ++++l ++ikevd+yk+ePwdL++ ++ +ee+ ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_028104280.1 7 VPPGFRFHPSDEELVDYYLRKKITYRRIDL-DIIKEVDLYKIEPWDLQElcRIGTEEQdEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAI 100 69**************************.99**********954555554445******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k++l+g++ktLvfykgrap+g+k+dW+mheyrle XP_028104280.1 101 YS-KHNLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 .899*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MNEFSRVPPG FRFHPSDEEL VDYYLRKKIT YRRIDLDIIK EVDLYKIEPW DLQELCRIGT 60 EEQDEWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKAI YSKHNLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETDEN GTSQEEGWVV CRVFKKRLTT MQKMSEHDSP MWYDDQVSFM 180 SDLDSPPKQI SQPNPTYHHQ YPCKKELDSQ YRYPIPHGHF LQLPLLDSPK LFQTTPTMSC 240 NSVATYGIDM NHGSTMQSSS LTQEEHIQQA HDQNLNSIYG NEQAVDQVTN WQVLDKYVAS 300 QLSHEDVVVT KENDYSNGEN IFQQLNKQEM ASENASTSMD LWK

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MNEFSRVPPG FRFHPSDEEL VDYYLRKKIT YRRIDLDIIK EVDLYKIEPW DLQELCRIGT  60
EEQDEWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKAI YSKHNLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETDEN GTSQEEGWVV CRVFKKRLTT MQKMSEHDSP MWYDDQVSFM  180
SDLDSPPKQI SQPNPTYHHQ YPCKKELDSQ YRYPIPHGHF LQLPLLDSPK LFQTTPTMSC  240
NSVATYGIDM NHGSTMQSSS LTQEEHIQQA HDQNLNSIYG NEQAVDQVTN WQVLDKYVAS  300
QLSHEDVVVT KENDYSNGEN IFQQLNKQEM ASENASTSMD LWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-133	NAC family protein