PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028104177.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 430aa MW: 49622.9 Da PI: 6.0911

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028104177.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74	3.1e-23	64	154	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+ ++GFs+rk++ +k+k+++eit+r fvC+keg+r +k++ +++r+e r+gC a++ +k+++ +gk+ +++++HnH+l+p XP_028104177.1 64 DFYNTYGGKLGFSIRKAYANKNKHTKEITSRMFVCYKEGSRGIDKRD-PLVKNPRQEVRCGCGARFSIKLDRiSGKYLACDIVEHHNHDLVP 154 6*****************************************999.9999***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MAEMEEQHDG EQRTVSDGEF SGDAMARRRH CGDSEVMEES NIVDDCGWKL KVGMLFDSEQ 60 AAYDFYNTYG GKLGFSIRKA YANKNKHTKE ITSRMFVCYK EGSRGIDKRD PLVKNPRQEV 120 RCGCGARFSI KLDRISGKYL ACDIVEHHNH DLVPQDCIHM LPSQRKISTT QAIEVELASQ 180 SGIPLRSAYE LFGRESGGRA SLGFTKLDQK NYLRSKRQKD LEYGEAGSVL HYFRKKTVEN 240 PSFFYAVQLD CDEQISNIFW ADAQMIMDYA QFGDVVTFDT TYKLNNEHRP FGSFVGFNHH 300 RETVIFGAAL MHDETAESFT WLFQIFLEAM SNKAPKTIFT DQDVAMAKAI PIVMPDTNHR 360 LCTWHLMQNA VKYVSSVFDD VGVKAVFSKF MHDIDDEEQF RIQWDQMLDK YDAFDNHWLE 420 QTFRVKEKWG

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MAEMEEQHDG EQRTVSDGEF SGDAMARRRH CGDSEVMEES NIVDDCGWKL KVGMLFDSEQ  60
AAYDFYNTYG GKLGFSIRKA YANKNKHTKE ITSRMFVCYK EGSRGIDKRD PLVKNPRQEV  120
RCGCGARFSI KLDRISGKYL ACDIVEHHNH DLVPQDCIHM LPSQRKISTT QAIEVELASQ  180
SGIPLRSAYE LFGRESGGRA SLGFTKLDQK NYLRSKRQKD LEYGEAGSVL HYFRKKTVEN  240
PSFFYAVQLD CDEQISNIFW ADAQMIMDYA QFGDVVTFDT TYKLNNEHRP FGSFVGFNHH  300
RETVIFGAAL MHDETAESFT WLFQIFLEAM SNKAPKTIFT DQDVAMAKAI PIVMPDTNHR  360
LCTWHLMQNA VKYVSSVFDD VGVKAVFSKF MHDIDDEEQF RIQWDQMLDK YDAFDNHWLE  420
QTFRVKEKWG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-91	FAR1 family protein