PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028104142.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YC | ||||||||
Protein Properties | Length: 123aa MW: 13263.2 Da PI: 10.4792 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 109 | 2.7e-34 | 30 | 110 | 19 | 98 |
NF-YC 19 helPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 h+lPlarikki+k + +dvkmis eaP+++skacelfi e+t rsw+ + + krrtl+k d+a+av td fdflv+ v XP_028104142.1 30 HSLPLARIKKIMKkSSDDVKMISGEAPIVFSKACELFIEEVTRRSWMMTVQGKRRTLHKEDVASAVVATDNFDFLVNLVSD 110 89**********825689**********************************************************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
MRQARTYSRI VSGSGGGGGG GGMSGRSGPH SLPLARIKKI MKKSSDDVKM ISGEAPIVFS 60 KACELFIEEV TRRSWMMTVQ GKRRTLHKED VASAVVATDN FDFLVNLVSD SAKSKGNPEI 120 MET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 4e-32 | NF-YC family protein |