PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028103951.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 315aa MW: 35046.1 Da PI: 5.8476 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.5 | 5.9e-17 | 47 | 95 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +gr++AeIrdps+ + r++lg+f+ta eAa a+++a+++++g XP_028103951.1 47 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAHEAALAYDRAALSIKG 95 56******.**********965...5**********************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MSTSKTSHKP VNGFKPRPVQ TGFSLTKIPP PPRERRGRRK QAETGRFLGV RRRPWGRYAA 60 EIRDPSTKER HWLGTFDTAH EAALAYDRAA LSIKGIQAKT NFVYSQNNNN NIAFHSLLSP 120 LDVQIQTLMQ FQPPPPQFTT TTTTTQTKQP INQNNLLFST DTNSGYLDCI VPDSCLKPPN 180 TTTNKDLMNG STSDYEEFSW KMGFPGIQTP CDDDTALPVD VPSVEDNLAD LHHQLPHFDG 240 LSCGLWGVGE KPWEVDYSFE LAAVIGSPLV VEDGWLESLY PINDNQSYGL MYSGNSSSSI 300 PSFGDLVDHL GYSAF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18560.1 | 1e-38 | ERF family protein |