PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028103268.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 555aa MW: 60997.5 Da PI: 6.6413

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028103268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.4	4.4e-31	230	287	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers ++++ei+Y+g+H+h+k XP_028103268.1 230 DDGYNWRKYGQKLVKGSEFPRSYYKCTHTNCEVKKIFERSP-SGQITEIVYKGTHDHPK 287 8**************************************.9************85 PP
2	WRKY	105.5	2.8e-33	383	441	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agC v+k+ver+++dpk+v++tYeg+Hnh+ XP_028103268.1 383 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCLVRKHVERASHDPKAVITTYEGKHNHD 441 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MEDSESESLS SLHKEESRVI HSSDHTRDAN SGSSSGRYKL MSPAKLPISR SPCMTIPPGL 60 SPTSFLDSPV LLSNMKAEPS PTTGSFFKPQ LMHWTGGTSG FSLATNSSNS DTIDEIKNGC 120 FEFKPHAGSD VSRLPAVTPM TSTGMDNQKN EPFERAQVQC QSQSFASLSS VISEMASSSK 180 ELNVPEPVHM FASRATVPAG VDSDELNKVQ ASQSDHKDIG PSVTPERSSD DGYNWRKYGQ 240 KLVKGSEFPR SYYKCTHTNC EVKKIFERSP SGQITEIVYK GTHDHPKPQL ARRYTAGSIM 300 SVQEKTDNIE PYGTPELSPR GTNDDSVEGG ASQLNCTNDE VDEDDPFSKR RKLDGVDIDV 360 IQVVKPIREP RVVVQTVSEV DILDDGYRWR KYGQKVVRGN PNPRSYYKCT NAGCLVRKHV 420 ERASHDPKAV ITTYEGKHNH DVPTARTSSH DMAGPATVNG MSRVRSEQSD SISLDLGVGI 480 NSSAENRSNE HQQILDAEPW QNHANGNGSN FKVVRVTPVS SYYGVPNLGH SFQTPPLNHS 540 SNPYPQNLER ILLGP

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MEDSESESLS SLHKEESRVI HSSDHTRDAN SGSSSGRYKL MSPAKLPISR SPCMTIPPGL  60
SPTSFLDSPV LLSNMKAEPS PTTGSFFKPQ LMHWTGGTSG FSLATNSSNS DTIDEIKNGC  120
FEFKPHAGSD VSRLPAVTPM TSTGMDNQKN EPFERAQVQC QSQSFASLSS VISEMASSSK  180
ELNVPEPVHM FASRATVPAG VDSDELNKVQ ASQSDHKDIG PSVTPERSSD DGYNWRKYGQ  240
KLVKGSEFPR SYYKCTHTNC EVKKIFERSP SGQITEIVYK GTHDHPKPQL ARRYTAGSIM  300
SVQEKTDNIE PYGTPELSPR GTNDDSVEGG ASQLNCTNDE VDEDDPFSKR RKLDGVDIDV  360
IQVVKPIREP RVVVQTVSEV DILDDGYRWR KYGQKVVRGN PNPRSYYKCT NAGCLVRKHV  420
ERASHDPKAV ITTYEGKHNH DVPTARTSSH DMAGPATVNG MSRVRSEQSD SISLDLGVGI  480
NSSAENRSNE HQQILDAEPW QNHANGNGSN FKVVRVTPVS SYYGVPNLGH SFQTPPLNHS  540
SNPYPQNLER ILLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-170	WRKY family protein