PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028103188.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 869aa MW: 99119.1 Da PI: 8.3193

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028103188.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.4	1.5e-20	91	185	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHel 89 +fYn+YAk GFs+rks+ +++ ++g++++r + Cs++g+r + + +ek+r ++a tr+gCka+++++ + gk++vt+++ +HnHel XP_028103188.1 91 DFYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSRKGQRLPIYLDrvAEKSRAPKALTRVGCKAQFRIRYDAdageGGKYVVTHFVADHNHEL 184 6***************9999.666699999*****99877766899999************987677789************9 PP FAR1 90 a 90 a XP_028103188.1 185 A 185 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 869 aa Download sequence
MAPAEVKREG DDYDIPNEAD GIRLMNESWA EPDHGCEAGP SNEEATNMNV EDGGADVKKE 60 MVDDAHRNDM VGDVERAILE QKFDSVEDGE DFYNAYAKAK GFSIRKSRFN TNKEGKVVSR 120 LWLCSRKGQR LPIYLDRVAE KSRAPKALTR VGCKAQFRIR YDADAGEGGK YVVTHFVADH 180 NHELAEQHCV MYLRSHRSLN SGDKAQAMAM RNVGVKTSQI MDYMVNQSGS YENVGFIRTD 240 LHNHIQAERR AEVEDGDAQG ALVYLCAKLD VDARFFYKYD VRNDNKLQNL FWADSKSRAD 300 YAKFGDVLIF DSTYRTNAYK KPFVMLAGVT SHFRTTIFAC VLLANETIET YTWVLETFME 360 AMGNKALVSV LTDGDKAMRE AIRRVFPDAR HRLCNWHLGK NAVSNVHISG FAHAFKQCMD 420 METDETKFEH GWTTMVEEFG LQTNSWVLET YEKRHMWAKA YMRGHFFAGM KSTQRLECMN 480 AYFNPFLQHK LKLYEFVRHY DRALARIRYN KAGDDVETNN TFPVLITPLR DIERPGAELF 540 TRNIFRMFCD EILEEGKLNV KDVFPLPDGQ KCYYIHKYKV KDKSWIVTHN PMDAAMRCSC 600 MKFESLGLPC CHMICVMKAE NLTKIPPTCV LHRWTRAASK DSQQWPQPSI DSTTTQTARY 660 GILCSSYNEM CFYASQSTEG FKEARDTCLP MTSRMKELYE RNLNGGNGDK GKHSFRRQFG 720 VEDPDVVKTK GTPGRASSNC RRPRKCGNYK CIGHTKRTCP KVRFSRTVGT KSDADTPHIT 780 DREYNAESLP VQCKTGLVDP STPHIKQQRL FFNVSPDSKQ PVGQYGSVEA AVWKNDSNTI 840 DEVNQQRSSN LKLTSSRRKS SNCGIGSNA

Sequence ? help Back to Top

Protein Sequence Length: 869 aa Download sequence

MAPAEVKREG DDYDIPNEAD GIRLMNESWA EPDHGCEAGP SNEEATNMNV EDGGADVKKE  60
MVDDAHRNDM VGDVERAILE QKFDSVEDGE DFYNAYAKAK GFSIRKSRFN TNKEGKVVSR  120
LWLCSRKGQR LPIYLDRVAE KSRAPKALTR VGCKAQFRIR YDADAGEGGK YVVTHFVADH  180
NHELAEQHCV MYLRSHRSLN SGDKAQAMAM RNVGVKTSQI MDYMVNQSGS YENVGFIRTD  240
LHNHIQAERR AEVEDGDAQG ALVYLCAKLD VDARFFYKYD VRNDNKLQNL FWADSKSRAD  300
YAKFGDVLIF DSTYRTNAYK KPFVMLAGVT SHFRTTIFAC VLLANETIET YTWVLETFME  360
AMGNKALVSV LTDGDKAMRE AIRRVFPDAR HRLCNWHLGK NAVSNVHISG FAHAFKQCMD  420
METDETKFEH GWTTMVEEFG LQTNSWVLET YEKRHMWAKA YMRGHFFAGM KSTQRLECMN  480
AYFNPFLQHK LKLYEFVRHY DRALARIRYN KAGDDVETNN TFPVLITPLR DIERPGAELF  540
TRNIFRMFCD EILEEGKLNV KDVFPLPDGQ KCYYIHKYKV KDKSWIVTHN PMDAAMRCSC  600
MKFESLGLPC CHMICVMKAE NLTKIPPTCV LHRWTRAASK DSQQWPQPSI DSTTTQTARY  660
GILCSSYNEM CFYASQSTEG FKEARDTCLP MTSRMKELYE RNLNGGNGDK GKHSFRRQFG  720
VEDPDVVKTK GTPGRASSNC RRPRKCGNYK CIGHTKRTCP KVRFSRTVGT KSDADTPHIT  780
DREYNAESLP VQCKTGLVDP STPHIKQQRL FFNVSPDSKQ PVGQYGSVEA AVWKNDSNTI  840
DEVNQQRSSN LKLTSSRRKS SNCGIGSNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-103	FAR1 family protein