PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028103110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 109aa MW: 12479.9 Da PI: 11.7754 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 25.2 | 4.1e-08 | 71 | 109 | 1 | 34 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslg 34 s y+GV++++++gr++A+++d s+n k+ ++++lg XP_028103110.1 71 SIYRGVTRHRWTGRFEAHLWDkSSWNTiqnKKgRQIYLG 109 57*******************777777755346999987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 109 aa Download sequence |
MKRSPSSCWS SSSTSSVESD LHPAHPDDDQ SAQPNPKAKR PRTRPRGAIN KNLNQSKSQK 60 IINPNSPRRS SIYRGVTRHR WTGRFEAHLW DKSSWNTIQN KKGRQIYLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G54320.1 | 1e-26 | AP2 family protein |