PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102962.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

DBB

Protein Properties

Length: 293aa MW: 31491.3 Da PI: 5.1709

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102962.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.3	2e-05	4	46	5	41
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ ++ e++ C ++ lC C ++ H H++++ XP_028102962.1 4 QCNVCGVAEAKVLCCADEAALCWACDEKVHAAnklaskHQRIS 46 7****99*******************6678888888776 PP
2	zf-B_box	27.6	6.2e-09	53	90	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..H 37 ++kC+ ++e +fC +++ l+C++C +++H H XP_028102962.1 53 PMPKCDICQEMVGYFFCLEDRALFCRKCDVSIHTAntH 90 689******9*******************55553 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MKIQCNVCGV AEAKVLCCAD EAALCWACDE KVHAANKLAS KHQRISLSSS SSPMPKCDIC 60 QEMVGYFFCL EDRALFCRKC DVSIHTANTH VSAHQRFLLT GVTVELESSE PGASSSSGNS 120 NSGEKISETE SRFLSKKGTP MSMSGQCNKV LPVQVSGVGD FAPTKFPLAG GSAAASIPQW 180 HSDEFVGLTE LNRTYGYMDN SSSKADTRKL GDSDCSAILS AGEEELDASE CLGQVPEASW 240 TVPQVPNSST LSGLDWPKNN QSLCDTAVFV PDTMQNASRY QPSCPSSKRQ REF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	1e-80	DBB family protein