PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028102733.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 278aa    MW: 32250.6 Da    PI: 6.6616
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028102733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1332e-102568144
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreee 44
                    +fYn Y+ ++GFs+r++  +k+k +++  +r +vC+keg++++e
  XP_028102733.1 25 DFYNIYGGRMGFSIRRDFCRKNKITNQLSCRLLVCNKEGFQKDE 68
                    6****************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MEPENDCAWK LKQGMTFDYE QCVYDFYNIY GGRMGFSIRR DFCRKNKITN QLSCRLLVCN  60
KEGFQKDEGT GKYVVTDFKE KHNHDLVSPE CAHMLPSQRK ISTTQAIELD LAAQSGLRLG  120
QSFDLMGREA GGRQCLGFTK LDQKNYLRTK RQQSLAYGEV GNVLQYFKEK SMQNPSFFYA  180
FQLDNEEQIT NMFWADAQMI MDYAQFGDVV TFDTTYKLNK EHRPFASFVG LNYHRETIIF  240
GAALLYDETA ETFVWLFQNF LEAMSGKAPK TLFTNQLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-59FAR1 family protein