PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028102720.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 189aa    MW: 21079 Da    PI: 8.499
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028102720.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-19554154
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                    ++++GVr+++ +g+Wv+eIr+p        +r++lg+f+taeeAaka+++a   ++
  XP_028102720.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFDTAEEAAKAYDQASILMN 54
                    59*******9.**********8.....334********************976665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFDTAE EAAKAYDQAS ILMNGRNAKT  60
NFPIAQNSEG DLIDTTTISF TGLSETLREK LQKSSKAPSP SLTCLRLDTE NSHIGVWQKH  120
AGACSDSNWV MRVELDTKKK GKTVEGGALA LPTLNSSPTL GGPKLKEEMD EEERIGLEMI  180
QELLQTPCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.15e-71ERF family protein