PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028102633.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 288aa    MW: 31900.9 Da    PI: 5.4426
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028102633.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.55.6e-0742632648
                     HHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 26 tIartmgkgRtlkqcksrwqkyl 48
                     +Ia +++ gRt++++k++w+++l
   XP_028102633.1 42 AIATHLP-GRTDNEIKNFWNTHL 63
                     59*****.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MTSYAGWQNM YLRTARYCMY GSFEADVTRQ YCMYGSFRGI PAIATHLPGR TDNEIKNFWN  60
THLKKKLIQM GFDPMTHQPR ADIFANLPHL IAMANLKDLI NQPLLEADQL ANLQYLQHLL  120
QFADSSSVTS SPYSQNSITD HIDALSLWNS IPPLKQNPVL NSSYSTQVLQ NQALFSIENA  180
TSSQPLHHNN PIITSLNIPV SDPQVPFCFQ TPLTSGINTA MISHEDDKPP NSPWLLPSPT  240
SSGTLPISEV SISNPGDGCS VSSYGGGGAS SSCWTELFFE EPFMHEIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.16e-42MYB family protein