PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028102610.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 234aa MW: 26201.8 Da PI: 8.9142 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 22.7 | 2.5e-07 | 197 | 219 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C +Cgk F+r nL+ H+r H XP_028102610.1 197 YFCMICGKGFKRDANLRMHMRGH 219 78*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MPEFRRRFGA LAVELVFRRD GRKAGGRCCG GVAEATEEET LVTRCRERER RERERNEMCD 60 SSRIQDWDPR AMLNNLSFVE QKIHQLQDLV HLVVSRRGQV VTRSDELVSQ QQQLITADLA 120 SIIVQLISIA GSLLPSVKQT RYTNPSITQF GQLGGVIFPS GPNLNGSAVQ QNIGGRKVSD 180 QSNHVDLAGS CKIEQNYFCM ICGKGFKRDA NLRMHMRGHG DEYKTPAARN VAAE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34370.2 | 8e-55 | C2H2 family protein |