PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102569.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 812aa MW: 88919.2 Da PI: 6.7724

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102569.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.9e-09	575	612	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + XP_028102569.1 575 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 612 664459******************************88 PP
2	BELL	123.4	9.1e-40	436	507	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r e+q++k+kLls+l+eVd+rY++y+eq+q+v++sF+ v+g gsa pYt+lA+ka+SrhFrcLkdaia q+ XP_028102569.1 436 DRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDLVMGFGSAVPYTALAQKAMSRHFRCLKDAIAAQL 507 589******************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 812 aa Download sequence
MGIAIPLPLP YVISHSKAYH HQIQISDKPN SANSMSQDYH HHHHHHQGIF SFSNGFERAQ 60 HEQQQQQQQQ QQQQQQQQHI AQHQIRRPPP LVAMEEDESG ELPVYETAGM LSEMFNFPHG 120 GSGTGNELLE NQISPNYRNT RPAAAEGVSS GWYENRIGGI GGLGPLSDDS KNQNVVNNQH 180 HHHQISSINV TDSAAAAMQL FLMNPQQPKS PSPSPSHHPA PATSSTLHML LPNPNPSSST 240 STLQGFHSHH QHHHQIGPPS QFTWVPDSAH EGVTTTAEIG GVVESQGLSL SLSSSLQHLE 300 AAKAEELRMG DGGMLFFNQV GSGSASAAQF PYRNLGGHHQ APLHLQGGGV DQNHQVHVGF 360 GSSSLGVVNV LRNSKYVKAA QELLEEFCCV GRGQFKKSKL GRHNNTNPNP NPSNSAAGGG 420 GSSSSSKDLP PLSAADRIEH QRRKVKLLSM LDEVDRRYNH YCEQMQMVVN SFDLVMGFGS 480 AVPYTALAQK AMSRHFRCLK DAIAAQLKQS CELLGEKDAG TSGVTKGETP RLRLLEQSLR 540 QQRAFHQMGM MEQEAWRPQR GLPERSVNIL RAWLFEHFLH PYPSDADKHL LARQTGLSRN 600 QVSNWFINAR VRLWKPMVEE MYQQESKEEE EEEDDADPDP DPDHNNNNDT DERETIRQQN 660 SALAQTPMPT TTTTTVTGAV NSVATAPPSS SSTTTTTTTT TGKRSQINAL DNDPSLMAIN 720 AQYFSENQAH RPTTTVSTAT TIHDSNTCRY GNYGTIATAT AATATGNPDI GIGSTLIRFG 780 TTTGDVSLTL GLRHAGNVPE KSPFSVRDFG SC

Sequence ? help Back to Top

Protein Sequence Length: 812 aa Download sequence

MGIAIPLPLP YVISHSKAYH HQIQISDKPN SANSMSQDYH HHHHHHQGIF SFSNGFERAQ  60
HEQQQQQQQQ QQQQQQQQHI AQHQIRRPPP LVAMEEDESG ELPVYETAGM LSEMFNFPHG  120
GSGTGNELLE NQISPNYRNT RPAAAEGVSS GWYENRIGGI GGLGPLSDDS KNQNVVNNQH  180
HHHQISSINV TDSAAAAMQL FLMNPQQPKS PSPSPSHHPA PATSSTLHML LPNPNPSSST  240
STLQGFHSHH QHHHQIGPPS QFTWVPDSAH EGVTTTAEIG GVVESQGLSL SLSSSLQHLE  300
AAKAEELRMG DGGMLFFNQV GSGSASAAQF PYRNLGGHHQ APLHLQGGGV DQNHQVHVGF  360
GSSSLGVVNV LRNSKYVKAA QELLEEFCCV GRGQFKKSKL GRHNNTNPNP NPSNSAAGGG  420
GSSSSSKDLP PLSAADRIEH QRRKVKLLSM LDEVDRRYNH YCEQMQMVVN SFDLVMGFGS  480
AVPYTALAQK AMSRHFRCLK DAIAAQLKQS CELLGEKDAG TSGVTKGETP RLRLLEQSLR  540
QQRAFHQMGM MEQEAWRPQR GLPERSVNIL RAWLFEHFLH PYPSDADKHL LARQTGLSRN  600
QVSNWFINAR VRLWKPMVEE MYQQESKEEE EEEDDADPDP DPDHNNNNDT DERETIRQQN  660
SALAQTPMPT TTTTTVTGAV NSVATAPPSS SSTTTTTTTT TGKRSQINAL DNDPSLMAIN  720
AQYFSENQAH RPTTTVSTAT TIHDSNTCRY GNYGTIATAT AATATGNPDI GIGSTLIRFG  780
TTTGDVSLTL GLRHAGNVPE KSPFSVRDFG SC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-128	TALE family protein