PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028102429.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 323aa MW: 35160.1 Da PI: 5.5545 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.8 | 2.4e-17 | 50 | 98 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +gr++AeIrdp++ + r++lg+f+ta eAa a+++a+++++g XP_028102429.1 50 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAALAYDRAALSMKG 98 56******.**********965...5************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MSTSKTSDKT LQAFDPTLAP TGFSLLQRNT SPPQPSERRG RRKPAEPGRF LGVRRRPWGR 60 YAAEIRDPTT KERHWLGTFD TAHEAALAYD RAALSMKGTQ ARTNFVYSDN NTTNNTAFGL 120 QTLFQPPHLL LPTTTTTDQT QTQTQTQQPT NHHNSPCSDN DSGSQSSYGS SPNNHNNFFF 180 SSSDNSNSGY LGCIVPDSCL KPPNNNASSS TTSNAGFPSN QTHWDQSSAV LGGGGELPYF 240 DGLNYGFWGS DQQPWEMNSC EPVSAEMINN NNNNPLMETL YPNNGNLVDY GSMPAISSSA 300 TSSSSVSPPF GGGVDDFGYS LFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18560.1 | 2e-47 | ERF family protein |