PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028102039.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | B3 | ||||||||
Protein Properties | Length: 690aa MW: 79573.1 Da PI: 10.6263 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 49.8 | 6.1e-16 | 51 | 126 | 17 | 98 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +p +f+ +h ++e + tl+++sg W+v l rkk ++++l++GW++Fv+ +++ +f++F++dg+ f v++++ XP_028102039.1 51 EIPPHFM-NHL-VNEAADKATLKSPSGDLWTVVL--RKKENGTYLQDGWSDFVRNHKVVKDEFLIFRYDGNLHF--SVQIYD 126 69999*9.552.3334459***************..********************************997666..777766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 690 aa Download sequence |
MELVPVRKNF KSVFADDGPS FYKIIKGSAS VELKLSISIF SSFLCNHYLQ EIPPHFMNHL 60 VNEAADKATL KSPSGDLWTV VLRKKENGTY LQDGWSDFVR NHKVVKDEFL IFRYDGNLHF 120 SVQIYDVNGL ERASASFTRK HQGADTSKQG TSAENEIDSL HLHQLKDSEL INPEPTRKRK 180 RGGWRKKVDP INLHQSKSFN CAPKAAPNKK RRCGRPRKNE ATDALVLRKL ERCKRAPEAA 240 SNEKRRPGRP RKNEAIGGTL NLCQPEPWKH APKAASNEKR RPGRPRKNEA IGGTPILCQP 300 APWKHAPKAA SNEKRSPGRP RKNEAVDTLI LHKSESCKRA SKAASAETRT SCRLRKNEAN 360 GTLTFCQPEP WKCAPKAASN EKRRPGRPRK NKAVEVLNLH KSESCKCASE AASTEKRTSG 420 SLRKNKANDT LILRQPEPCK QTFEAASSRK RKCGRPTKKD DPLHQSKSCK YAQGVKKFKK 480 IKRTERKVKE KEMDPTIMES DRQSKVNEED KDNKERKKKR CKIHKEHHLR NIKHTKKKIK 540 EKKVYPTIKE ADSQLEVNEE EEVNSKRKKR KSETHEKHHS RKVKHTKSNI KGQEIEPTRE 600 ADSQLKMNEE EKDNSKRKKR KCEKQEQQHS QTMRPPTEEE RARVLEKADS FVSKFPCYKR 660 CLQYYDVHKM FFLVSMLHPL YIYPQSFLAF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 449 | 479 | RKRKCGRPTKKDDPLHQSKSCKYAQGVKKFK |
2 | 449 | 482 | RKRKCGRPTKKDDPLHQSKSCKYAQGVKKFKKIK |
3 | 479 | 512 | RKRKCGRPTKKDDPLHQSKSCKYAQGVKKFKKIK |
4 | 482 | 489 | KRTERKVK |
5 | 516 | 546 | RKRKCGRPTKKDDPLHQSKSCKYAQGVKKFK |
6 | 517 | 542 | KKKRCKIHKEHHLRNIKHTKKKIKEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 1e-13 | B3 family protein |