PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028102038.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 731aa    MW: 84360.6 Da    PI: 10.6028
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028102038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.83e-16321091598
                     -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                      l +p +f+ +h  ++e   + tl+++sg  W+v l  rkk ++++l++GW++Fv+ +++   +f++F++dg+  f   v++++
  XP_028102038.1  32 ELEIPPHFM-NHL-VNEAADKATLKSPSGDLWTVVL--RKKENGTYLQDGWSDFVRNHKVVKDEFLIFRYDGNLHF--SVQIYD 109
                     578******.552.3334459***************..********************************997666..777766 PP
2B349.76.8e-16649731997
                     HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   9 dvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     dv+k   l + k+f   h  ++k     ++l d++g+ W+v++ + +++  + +++GW++Fv an+LkegD+++F+l++  e+e++v+vf
  XP_028102038.1 649 DVHKMFFLPIDKPFSVVHfPLDKS---HIVLWDSKGKDWNVTVLFINGR--HKFSEGWRSFVLANQLKEGDVCIFELIK--EKEMLVHVF 731
                     566777788889997777655643...5***************777766..679**********************997..555688876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 731 aa     Download sequence    
MELVPVRKNF KSVFADDGPS FYKIIKGSAS VELEIPPHFM NHLVNEAADK ATLKSPSGDL  60
WTVVLRKKEN GTYLQDGWSD FVRNHKVVKD EFLIFRYDGN LHFSVQIYDV NGLERASASF  120
TRKHQGADTS KQGTSAENEI DSLHLHQLKD SELINPEPTR KRKRGGWRKK VDPINLHQSK  180
SFNCAPKAAP NKKRRCGRPR KNEATDALVL RKLERCKRAP EAASNEKRRP GRPRKNEAIG  240
GTLNLCQPEP WKHAPKAASN EKRRPGRPRK NEAIGGTPIL CQPAPWKHAP KAASNEKRSP  300
GRPRKNEAVD TLILHKSESC KRASKAASAE TRTSCRLRKN EANGTLTFCQ PEPWKCAPKA  360
ASNEKRRPGR PRKNKAVEVL NLHKSESCKC ASEAASTEKR TSGSLRKNKA NDTLILRQPE  420
PCKQTFEAAS SRKRKCGRPT KKDDPLHQSK SCKYAQGVKK FKKIKRTERK VKEKEMDPTI  480
MESDRQSKVN EEDKDNKERK KKRCKIHKEH HLRNIKHTKK KIKEKKVYPT IKEADSQLEV  540
NEEEEVNSKR KKRKSETHEK HHSRKVKHTK SNIKGQEIEP TREADSQLKM NEEEKDNSKR  600
KKRKCEKQEQ QHSQTMRPPT EEERARVLEK ADSFVSKFPC YKRCLQYYDV HKMFFLPIDK  660
PFSVVHFPLD KSHIVLWDSK GKDWNVTVLF INGRHKFSEG WRSFVLANQL KEGDVCIFEL  720
IKEKEMLVHV F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1432462RKRKCGRPTKKDDPLHQSKSCKYAQGVKKFK
2432465RKRKCGRPTKKDDPLHQSKSCKYAQGVKKFKKIK
3462495RKRKCGRPTKKDDPLHQSKSCKYAQGVKKFKKIK
4465472KRTERKVK
5499529RKRKCGRPTKKDDPLHQSKSCKYAQGVKKFK
6500525KKKRCKIHKEHHLRNIKHTKKKIKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-15B3 family protein