PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028102037.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 748aa    MW: 86342.9 Da    PI: 10.5853
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028102037.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.76.8e-16511261798
                     E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                      +p +f+ +h  ++e   + tl+++sg  W+v l  rkk ++++l++GW++Fv+ +++   +f++F++dg+  f   v++++
  XP_028102037.1  51 EIPPHFM-NHL-VNEAADKATLKSPSGDLWTVVL--RKKENGTYLQDGWSDFVRNHKVVKDEFLIFRYDGNLHF--SVQIYD 126
                     69999*9.552.3334459***************..********************************997666..777766 PP
2B349.67e-16666748997
                     HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   9 dvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     dv+k   l + k+f   h  ++k     ++l d++g+ W+v++ + +++  + +++GW++Fv an+LkegD+++F+l++  e+e++v+vf
  XP_028102037.1 666 DVHKMFFLPIDKPFSVVHfPLDKS---HIVLWDSKGKDWNVTVLFINGR--HKFSEGWRSFVLANQLKEGDVCIFELIK--EKEMLVHVF 748
                     566777788889997777655643...5***************777766..679**********************997..555688876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 748 aa     Download sequence    
MELVPVRKNF KSVFADDGPS FYKIIKGSAS VELKLSISIF SSFLCNHYLQ EIPPHFMNHL  60
VNEAADKATL KSPSGDLWTV VLRKKENGTY LQDGWSDFVR NHKVVKDEFL IFRYDGNLHF  120
SVQIYDVNGL ERASASFTRK HQGADTSKQG TSAENEIDSL HLHQLKDSEL INPEPTRKRK  180
RGGWRKKVDP INLHQSKSFN CAPKAAPNKK RRCGRPRKNE ATDALVLRKL ERCKRAPEAA  240
SNEKRRPGRP RKNEAIGGTL NLCQPEPWKH APKAASNEKR RPGRPRKNEA IGGTPILCQP  300
APWKHAPKAA SNEKRSPGRP RKNEAVDTLI LHKSESCKRA SKAASAETRT SCRLRKNEAN  360
GTLTFCQPEP WKCAPKAASN EKRRPGRPRK NKAVEVLNLH KSESCKCASE AASTEKRTSG  420
SLRKNKANDT LILRQPEPCK QTFEAASSRK RKCGRPTKKD DPLHQSKSCK YAQGVKKFKK  480
IKRTERKVKE KEMDPTIMES DRQSKVNEED KDNKERKKKR CKIHKEHHLR NIKHTKKKIK  540
EKKVYPTIKE ADSQLEVNEE EEVNSKRKKR KSETHEKHHS RKVKHTKSNI KGQEIEPTRE  600
ADSQLKMNEE EKDNSKRKKR KCEKQEQQHS QTMRPPTEEE RARVLEKADS FVSKFPCYKR  660
CLQYYDVHKM FFLPIDKPFS VVHFPLDKSH IVLWDSKGKD WNVTVLFING RHKFSEGWRS  720
FVLANQLKEG DVCIFELIKE KEMLVHVF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1449479RKRKCGRPTKKDDPLHQSKSCKYAQGVKKFK
2449482RKRKCGRPTKKDDPLHQSKSCKYAQGVKKFKKIK
3479512RKRKCGRPTKKDDPLHQSKSCKYAQGVKKFKKIK
4482489KRTERKVK
5516546RKRKCGRPTKKDDPLHQSKSCKYAQGVKKFK
6517542KKKRCKIHKEHHLRNIKHTKKKIKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-13B3 family protein