PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102020.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 623aa MW: 71131.8 Da PI: 5.4178

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44.4	2.9e-14	20	102	9	97
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 v k+ + +p f+++ +g + + l++ +g+ W v + +k +++ +++GW +Fv++n +++g f+vF +dg+ f +k+f XP_028102020.1 20 KVKKHTAMPIPSAFVKHVKGA--IPDKAFLRNCHGKLWPVVV--TKVGNQLCFKDGWVKFVEDNSVEVGNFLVFDFDGNYVF--DFKLF 102 67888899*****777655..5668***********..*****************************9998766..55555 PP
2	B3	42.9	8.7e-14	505	582	10	89
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 ++++ l++p + +++h++k + l+l de+gr+W+ ++ ++ gr++lt GWk F+k n+Lk D ++ ++++ + XP_028102020.1 505 STRRTELYVPMDVIRDHNLK--LPSNLILLDEEGRKWSTRVVQWND-GRTWLTVGWKAFCKWNNLKWEDRCICEFIRGkGR 582 4566779********998..6668***********77776.5789*******************999876344 PP

Sequence ? help Back to Top
Protein Sequence Length: 623 aa Download sequence
MHAYDGTQNV FFLGFELIKK VKKHTAMPIP SAFVKHVKGA IPDKAFLRNC HGKLWPVVVT 60 KVGNQLCFKD GWVKFVEDNS VEVGNFLVFD FDGNYVFDFK LFGRTECEIK MIGSSGFKVK 120 EEKEEEEEEE EKVKEEEEEE EEEEEDELEA NTLRKKTEKG KSEKSTKGLK KIKQGTNCLI 180 NLDGNKGRVT IKDKGGNKRA YRTEVEDEEG DELEAKTLRK KTEKGKSEKS TKGLKKINQG 240 TNYGNKGKAT IKDKGGNKRA CRMEVEDEEE ETDDDDEEED ELEATTLRKK AEKGKSEKST 300 KGLKKINQGT CCLLNLDGNK RKATIKDKGG NKRAYTMEVE EEEEETDDDE EEEEDELEAK 360 ALRKKTENGI GEKSTKGLKK INQGTSYGNK GKATIKDKGG NKRAYTMEVE EEEEEETDDD 420 DDEEDELEAK ILRKKTEKEK SEKSAKGLEK ISQGTSYGNK GKDTIKGEGG NKRADTIAVE 480 DDEDVFKYGM VSWPKNPCFV AKLRSTRRTE LYVPMDVIRD HNLKLPSNLI LLDEEGRKWS 540 TRVVQWNDGR TWLTVGWKAF CKWNNLKWED RCICEFIRGK GRRGIFIKTC ILRAGSWLPK 600 KDSILSSDHQ DQVDKRHFQG SPK

Sequence ? help Back to Top

Protein Sequence Length: 623 aa Download sequence

MHAYDGTQNV FFLGFELIKK VKKHTAMPIP SAFVKHVKGA IPDKAFLRNC HGKLWPVVVT  60
KVGNQLCFKD GWVKFVEDNS VEVGNFLVFD FDGNYVFDFK LFGRTECEIK MIGSSGFKVK  120
EEKEEEEEEE EKVKEEEEEE EEEEEDELEA NTLRKKTEKG KSEKSTKGLK KIKQGTNCLI  180
NLDGNKGRVT IKDKGGNKRA YRTEVEDEEG DELEAKTLRK KTEKGKSEKS TKGLKKINQG  240
TNYGNKGKAT IKDKGGNKRA CRMEVEDEEE ETDDDDEEED ELEATTLRKK AEKGKSEKST  300
KGLKKINQGT CCLLNLDGNK RKATIKDKGG NKRAYTMEVE EEEEETDDDE EEEEDELEAK  360
ALRKKTENGI GEKSTKGLKK INQGTSYGNK GKATIKDKGG NKRAYTMEVE EEEEEETDDD  420
DDEEDELEAK ILRKKTEKEK SEKSAKGLEK ISQGTSYGNK GKDTIKGEGG NKRADTIAVE  480
DDEDVFKYGM VSWPKNPCFV AKLRSTRRTE LYVPMDVIRD HNLKLPSNLI LLDEEGRKWS  540
TRVVQWNDGR TWLTVGWKAF CKWNNLKWED RCICEFIRGK GRRGIFIKTC ILRAGSWLPK  600
KDSILSSDHQ DQVDKRHFQG SPK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	169	174	LKKIKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06220.1	4e-12	B3 family protein