PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102014.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 450aa MW: 50360 Da PI: 9.5386

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102014.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.4	3.4e-15	29	114	5	96
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 ++ s+ l+ + l+lp kf+++ g++ + tl++++g W+v l + ++++++t+GW eFvk + +++g +vF ++g+s+f v + XP_028102014.1 29 MMGSSILQDNKLRLPGKFVRKLGNV--FPAVATLTTPNGCAWKVGL--KVIDDKVWFTEGWHEFVKHQSIRVGYLLVFIYMGNSNF--SVNI 114 6778889999**********988..8889***********..99999***************************9999..6655 PP
2	B3	64	2.3e-20	329	419	4	98
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +l +s+v k l +p +fae++ gg++ +tl+ +sg++W v++ +r +s l+kGW eFv+ n+L+egD++vF+l++ e l+v++f XP_028102014.1 329 ILRRSYVYKGIGLHMPASFAEKYlGGVSG---FITLQVSSGEKWPVRCMWRDGSA--KLSKGWPEFVSTNKLEEGDVCVFELIKMGEVVLKVTIF 418 57789****************988854...5***********7766665..5***********************988888999999 PP - CS B3 98 r 98 r XP_028102014.1 419 R 419 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MGQQGLVTDA DYRWSSSLAS NKSPIFYRMM GSSILQDNKL RLPGKFVRKL GNVFPAVATL 60 TTPNGCAWKV GLKVIDDKVW FTEGWHEFVK HQSIRVGYLL VFIYMGNSNF SVNIYDLGTA 120 EIKYQCNNSE GPSGGNWCSV PYKGGAADDD SVEILNSRSQ TPTSLENKAF YETLYQQKLG 180 KSYDHQGIRE ADSIIEFQAK MNRTGISNSH GSVSDEARGH AAKMFPYVQY TGGNFNGADL 240 KNSHYKANGG NLHVDIGRLH SLNQRHEITR KRKRESGPSK HGSEVQIPGT ETSRGTFLRK 300 WKVVTPEEKE RVLNTSKLFQ SEYPFCRVIL RRSYVYKGIG LHMPASFAEK YLGGVSGFIT 360 LQVSSGEKWP VRCMWRDGSA KLSKGWPEFV STNKLEEGDV CVFELIKMGE VVLKVTIFRV 420 AEAAAEPVNQ LPKEHLSRTS QFASAYDLNG

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MGQQGLVTDA DYRWSSSLAS NKSPIFYRMM GSSILQDNKL RLPGKFVRKL GNVFPAVATL  60
TTPNGCAWKV GLKVIDDKVW FTEGWHEFVK HQSIRVGYLL VFIYMGNSNF SVNIYDLGTA  120
EIKYQCNNSE GPSGGNWCSV PYKGGAADDD SVEILNSRSQ TPTSLENKAF YETLYQQKLG  180
KSYDHQGIRE ADSIIEFQAK MNRTGISNSH GSVSDEARGH AAKMFPYVQY TGGNFNGADL  240
KNSHYKANGG NLHVDIGRLH SLNQRHEITR KRKRESGPSK HGSEVQIPGT ETSRGTFLRK  300
WKVVTPEEKE RVLNTSKLFQ SEYPFCRVIL RRSYVYKGIG LHMPASFAEK YLGGVSGFIT  360
LQVSSGEKWP VRCMWRDGSA KLSKGWPEFV STNKLEEGDV CVFELIKMGE VVLKVTIFRV  420
AEAAAEPVNQ LPKEHLSRTS QFASAYDLNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49480.1	6e-41	B3 family protein