PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102013.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 476aa MW: 53293.3 Da PI: 9.4441

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.3	3.7e-15	29	114	5	96
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 ++ s+ l+ + l+lp kf+++ g++ + tl++++g W+v l + ++++++t+GW eFvk + +++g +vF ++g+s+f v + XP_028102013.1 29 MMGSSILQDNKLRLPGKFVRKLGNV--FPAVATLTTPNGCAWKVGL--KVIDDKVWFTEGWHEFVKHQSIRVGYLLVFIYMGNSNF--SVNI 114 6778889999**********988..8889***********..99999***************************9999..6655 PP
2	B3	63.9	2.5e-20	355	445	4	98
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +l +s+v k l +p +fae++ gg++ +tl+ +sg++W v++ +r +s l+kGW eFv+ n+L+egD++vF+l++ e l+v++f XP_028102013.1 355 ILRRSYVYKGIGLHMPASFAEKYlGGVSG---FITLQVSSGEKWPVRCMWRDGSA--KLSKGWPEFVSTNKLEEGDVCVFELIKMGEVVLKVTIF 444 57789****************988854...5***********7766665..5***********************988888999999 PP - CS B3 98 r 98 r XP_028102013.1 445 R 445 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MGQQGLVTDA DYRWSSSLAS NKSPIFYRMM GSSILQDNKL RLPGKFVRKL GNVFPAVATL 60 TTPNGCAWKV GLKVIDDKVW FTEGWHEFVK HQSIRVGYLL VFIYMGNSNF SVNIYDLGTA 120 EIKYQCNNSE GPSGGNWCSV PYKGGAADDD SVEILNSRSQ TPTSLENKAF YETLYQQKLG 180 KSYDHQGIRE ADSIIEFQAK MNRTGISNSH GSVSDEARGH AAKMFPYVQY TGGNFNGADL 240 KNSHYKANGG NLHVDIGRSV ARSTRDIGIQ CSNTEFMTTA YENRLHSLNQ RHEITRKRKR 300 ESGPSKHGSE VQIPGTETSR GTFLRKWKVV TPEEKERVLN TSKLFQSEYP FCRVILRRSY 360 VYKGIGLHMP ASFAEKYLGG VSGFITLQVS SGEKWPVRCM WRDGSAKLSK GWPEFVSTNK 420 LEEGDVCVFE LIKMGEVVLK VTIFRVAEAA AEPVNQLPKE HLSRTSQFAS AYDLNG

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MGQQGLVTDA DYRWSSSLAS NKSPIFYRMM GSSILQDNKL RLPGKFVRKL GNVFPAVATL  60
TTPNGCAWKV GLKVIDDKVW FTEGWHEFVK HQSIRVGYLL VFIYMGNSNF SVNIYDLGTA  120
EIKYQCNNSE GPSGGNWCSV PYKGGAADDD SVEILNSRSQ TPTSLENKAF YETLYQQKLG  180
KSYDHQGIRE ADSIIEFQAK MNRTGISNSH GSVSDEARGH AAKMFPYVQY TGGNFNGADL  240
KNSHYKANGG NLHVDIGRSV ARSTRDIGIQ CSNTEFMTTA YENRLHSLNQ RHEITRKRKR  300
ESGPSKHGSE VQIPGTETSR GTFLRKWKVV TPEEKERVLN TSKLFQSEYP FCRVILRRSY  360
VYKGIGLHMP ASFAEKYLGG VSGFITLQVS SGEKWPVRCM WRDGSAKLSK GWPEFVSTNK  420
LEEGDVCVFE LIKMGEVVLK VTIFRVAEAA AEPVNQLPKE HLSRTSQFAS AYDLNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49480.1	8e-41	B3 family protein