PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028101972.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 292aa MW: 31499.1 Da PI: 6.2424

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028101972.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00066	120	142	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H XP_028101972.1 120 YECKTCNRTFPSFQALGGHRASH 142 99**********99999998887 PP
2	zf-C2H2	13	0.00031	196	218	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg Fs+ L H+r+H XP_028101972.1 196 HECSVCGSEFSSGQALGGHMRRH 218 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MDMESPEEFT GSNDHTLILR RKRTKRERPP SPSPPAPTTS TASSGGGGSG GGGGGGSGDF 60 YSSSIPSPTT SSGEISTSVD EDEDMANCLI LLAQGVGPTG PTTLEEEGTT TIGKVRFYVY 120 ECKTCNRTFP SFQALGGHRA SHKKPKVEEK RIILVTPPSP EEEKEEEARF NKFSPPPPLL 180 QTATKSSFIS NKLKVHECSV CGSEFSSGQA LGGHMRRHRA PPNTRITMIA DTSPIESQKE 240 SDKPRKILSL DLNLPAPLED DDGHDHIDSR FQFTPNKQGL VFSGPALVDC HY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	27	RRKRTKRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	1e-51	C2H2 family protein