PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028101837.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 96aa MW: 11341.5 Da PI: 11.1159 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 65.1 | 7.5e-21 | 9 | 53 | 1 | 45 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 kr e++sn+qvt+ +RrngilKKA+ELS+L d+++ +++fs+tgk XP_028101837.1 9 KRLESTSNQQVTYLRRRNGILKKAKELSILYDIDIVLLMFSPTGK 53 789*****************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence |
MERVKLKIKR LESTSNQQVT YLRRRNGILK KAKELSILYD IDIVLLMFSP TGKATLFRRE 60 RSNIEEVITK FAQLTPQERT KRKLESLEVR LILPVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18750.1 | 4e-44 | M-type_MADS family protein |