PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028101811.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 246aa MW: 27016.8 Da PI: 6.5123 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.4 | 1.5e-17 | 84 | 134 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr ++ +g+Wv+eIr+p + + r++lg++ ta +Aa+a++ a+++++ge XP_028101811.1 84 TYRGVRMRS-WGKWVCEIREPMK---KSRIWLGTYPTATMAARAHDVAALAIKGE 134 69****998.**********843...5***********************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MEELDCLPSS STTTTTSSSS TTTSSSFLSN SHSLNSCSSF KKTTRSAPEE SKAKKGLKRV 60 LQEVKNGNED RKRHKNGGES KHPTYRGVRM RSWGKWVCEI REPMKKSRIW LGTYPTATMA 120 ARAHDVAALA IKGESAYLNF PELAHRLPCP ASTSPKDIQV AAASAATSTT LSCEAEPSQA 180 KLPSSRSSTT FSSDNDDDDN DDTFLDLPDL SLDATDPSDK YIYYASSWQL AGVDTGFRHE 240 EPFLWE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 5e-52 | ERF family protein |