PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028101608.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 250aa MW: 27151.4 Da PI: 9.7771 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61 | 2.7e-19 | 26 | 76 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 +++GVr ++ +gr++AeIrdp r r++lg+f+taeeAaka++ a+++++g+ XP_028101608.1 26 HFRGVRKRP-WGRYAAEIRDP---A-RkSRVWLGTFDTAEEAAKAYDTAAREFRGA 76 69*******.**********8...2.35*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MAPKEKLDGG AVKATATAAA IGKEAHFRGV RKRPWGRYAA EIRDPARKSR VWLGTFDTAE 60 EAAKAYDTAA REFRGAKAKT NFPQPEENNN VKINEIKKVN CNRSPSESST VESSSREGFS 120 PARMVDSSPP LVLSLSHGCG FTGFGTAASR FPFQQPQFHA SPPIGVLPTA ANQLFYFDAI 180 LRSGRMNQDF LRDLQNQRMK AAAEFRVAAH GGGAQSDSDS SSVIDLNLND VKPHRALCID 240 LNHPPPPETA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 1e-24 | ERF family protein |