PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028101564.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 129aa MW: 14698.4 Da PI: 9.5015 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.2 | 1.1e-14 | 22 | 65 | 1 | 48 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 sgy GVr+++ +gr++AeIr p++ + r++lg+f+ eeAa a++ XP_028101564.1 22 SGYLGVRRRP-WGRYAAEIRNPYT---KERHWLGTFDPSEEAALAYDL 65 79********.**********865...5******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MENLPHLLNR NPKRRRSSRH SSGYLGVRRR PWGRYAAEIR NPYTKERHWL GTFDPSEEAA 60 LAYDLSSISF SGIERARTNF HYPFSAFPSP PPPPPPPPPS PDIEESDESL FIASILQSFS 120 QPSNFSFSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12890.1 | 3e-27 | ERF family protein |