PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028101452.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 273aa MW: 29451.9 Da PI: 7.2774

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028101452.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0013	118	140	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++Fs+ L H +H XP_028101452.1 118 YECKTCNRCFSSFQALGGHRASH 140 99**********99999998887 PP
2	zf-C2H2	13.2	0.00027	193	215	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg Fs+ L H+r+H XP_028101452.1 193 HECSVCGAEFSSGQALGGHMRRH 215 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MEVQEEAMLS KDNTQIIKGK RTKRPRQASP LALTMSSTSS SIAEGGSSGG GGGSVSDNSG 60 GAATSHTNSG EFTDTTVEEE HDMANCLILL AQGQNTKSPE PVVAPTTTRS KATGLDLYEC 120 KTCNRCFSSF QALGGHRASH KKPKAMGEEN KKPLMVFMKE SDQDRAHDYE STALSLQIPN 180 RVMPTTQNKS RVHECSVCGA EFSSGQALGG HMRRHRTMNS PAESPEVKKP RAVLSLDLNL 240 PAPEDDHRES KFPFGSKEQV IVFSANSLVD CHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	5e-57	C2H2 family protein