PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028101425.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 747aa MW: 83404.5 Da PI: 4.7407

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028101425.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.6	1.2e-12	592	635	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r rW++++ el+++av+q+G++ + I + ++ gRt++q+k+++ k XP_028101425.1 592 RSRWSKQDTELFYEAVRQFGTD-ISMIQQLFP-GRTRNQVKLKYKK 635 78******************.*****.*********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 747 aa Download sequence
MGTDLDPLDE IFPERIANKA RAGGKFQPKA KASSRKEPSA PIPSTQSVQV VDIAENELTA 60 LVGPSLVSSE TVNTKKPLEN SEDSVSGVHS SDKSVSVSPS LEHFVIEETL GHNVGLHSDI 120 TIPDINGDWN STTGKSAGES ADIFFGLESF DDVNSQPTTA TVSAASRPSD NVDPSIQLRN 180 EFIIACPGNN DSEGSLASPE IPTVHVSDTR SAEKGALILD NRRLEIEEAE AVPCLETLDN 240 LYKLTPRPEQ RSCKFQPKPK IKIGREKPGT GISHANGVES VPCFQDALSI PSNGEYILRP 300 NDILDFSSSR FGDSISELPV NEEPTNHAKT SHPDKFIPGK HPEVVPRSLE KNRRKKKTPT 360 VLDDSLEHHN SSISGQENEA GRSMRQLRKR TNACRLVDES EDEASDDENY TNECSSDSLI 420 DENDNDDGIN QDAKKTRNTR VPRKSNKSAS QKEKPVRKHK KVKEVPDQTT REPPKKFSHS 480 TRRKRRQVDK VLLEIPEEEI DFQSLSIREI ILLAEYRERM SSKEGKTSEP PSTNQRYGSS 540 PNSFGNPFTN YNEDENFESE QGGGSSNDPA NPVVQESSNY PNYQSYMKKT PRSRWSKQDT 600 ELFYEAVRQF GTDISMIQQL FPGRTRNQVK LKYKKEECQQ PLRLQEALTN RAEDHSHYQL 660 VIERLQQLAA EEKQNSYGDD SIGLTGNEEE ANPEINGAQE EEVAKPEQGE EGEVQSMEPE 720 VSQVQSPVNS YDSEDELCRW SQYKSEF

Sequence ? help Back to Top

Protein Sequence Length: 747 aa Download sequence

MGTDLDPLDE IFPERIANKA RAGGKFQPKA KASSRKEPSA PIPSTQSVQV VDIAENELTA  60
LVGPSLVSSE TVNTKKPLEN SEDSVSGVHS SDKSVSVSPS LEHFVIEETL GHNVGLHSDI  120
TIPDINGDWN STTGKSAGES ADIFFGLESF DDVNSQPTTA TVSAASRPSD NVDPSIQLRN  180
EFIIACPGNN DSEGSLASPE IPTVHVSDTR SAEKGALILD NRRLEIEEAE AVPCLETLDN  240
LYKLTPRPEQ RSCKFQPKPK IKIGREKPGT GISHANGVES VPCFQDALSI PSNGEYILRP  300
NDILDFSSSR FGDSISELPV NEEPTNHAKT SHPDKFIPGK HPEVVPRSLE KNRRKKKTPT  360
VLDDSLEHHN SSISGQENEA GRSMRQLRKR TNACRLVDES EDEASDDENY TNECSSDSLI  420
DENDNDDGIN QDAKKTRNTR VPRKSNKSAS QKEKPVRKHK KVKEVPDQTT REPPKKFSHS  480
TRRKRRQVDK VLLEIPEEEI DFQSLSIREI ILLAEYRERM SSKEGKTSEP PSTNQRYGSS  540
PNSFGNPFTN YNEDENFESE QGGGSSNDPA NPVVQESSNY PNYQSYMKKT PRSRWSKQDT  600
ELFYEAVRQF GTDISMIQQL FPGRTRNQVK LKYKKEECQQ PLRLQEALTN RAEDHSHYQL  660
VIERLQQLAA EEKQNSYGDD SIGLTGNEEE ANPEINGAQE EEVAKPEQGE EGEVQSMEPE  720
VSQVQSPVNS YDSEDELCRW SQYKSEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	5e-43	MYB_related family protein