PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028101012.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 320aa MW: 35784.4 Da PI: 8.8498

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028101012.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.1e-05	8	28	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H XP_028101012.1 8 CEICNKGFQRDQNLQLHRRGH 28 *******************88 PP
2	zf-C2H2	12.7	0.00039	81	103	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H + + XP_028101012.1 81 WKCEKCSKHYAVQSDWKAHSKIC 103 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MATNRFLCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRTNK EVKKVYVCPE ATCVHHEPSR 60 ALGDLTGIKK HFSRKHGEKK WKCEKCSKHY AVQSDWKAHS KICGTREYRC DCGTLFSRKD 120 TFVTHRAFCD ALSQETSRGG ITSSIPFLSS QTPLSTSTTS HLNPFPLKTE QDHHHHQSFH 180 LRPSHLPPWL NHSFIYHENP NPNPSQTLIP TLPSFQPTAS PHMSATALLQ KAAQMSVTMS 240 QPCLSSGGCM EQVGNVNMMN SLLPCGSVFE GSSSSSSFEK ALNGMLNPKV DSNIQETLTK 300 QTMEDGDSGG NGLTRDFFGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	2e-95	C2H2 family protein