PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028101007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 396aa MW: 43857.4 Da PI: 8.9626 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.5 | 0.00011 | 84 | 104 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H XP_028101007.1 84 CEICNKGFQRDQNLQLHRRGH 104 *******************88 PP | |||||||
2 | zf-C2H2 | 12.3 | 0.00052 | 157 | 179 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H + + XP_028101007.1 157 WKCEKCSKHYAVQSDWKAHSKIC 179 58*****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 396 aa Download sequence |
MMNSMRVDDN LSNLISASNK ASISSSHRNE VGSSTVYPDQ QSFASPNQPP PPKKRRNLPG 60 NPDPDAAVVA LSPSTLMATN RFLCEICNKG FQRDQNLQLH RRGHNLPWKL KQRTNKEVKK 120 VYVCPEATCV HHEPSRALGD LTGIKKHFSR KHGEKKWKCE KCSKHYAVQS DWKAHSKICG 180 TREYRCDCGT LFSRKDTFVT HRAFCDALSQ ETSRGGITSS IPFLSSQTPL STSTTSHLNP 240 FPLKTEQDHH HHQSFHLRPS HLPPWLNHSF IYHENPNPNP SQTLIPTLPS FQPTASPHMS 300 ATALLQKAAQ MSVTMSQPCL SSGGCMEQVG NVNMMNSLLP CGSVFEGSSS SSSFEKALNG 360 MLNPKVDSNI QETLTKQTME DGDSGGNGLT RDFFGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G55110.1 | 1e-103 | C2H2 family protein |