PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028101003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 134aa MW: 15141.1 Da PI: 6.6712 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 34.8 | 4.6e-11 | 1 | 42 | 58 | 99 |
DUF260 58 msslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 m+s++++A++ra+dPv G++++i++l+qq+++ +ael+++ + XP_028101003.1 1 MKSMIFHANVRANDPVGGCHRIIRELEQQIQHYEAELEVVLR 42 89***********************************98765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 134 aa Download sequence |
MKSMIFHANV RANDPVGGCH RIIRELEQQI QHYEAELEVV LRQLVVCRVE NVVNEMQNPN 60 SVVGSSDYYG HQPIQDPLGF DDMQRSGAIK VDMQASSSSS MVMNNGKQIL LRNRNISSHN 120 SPFYSSPMNQ LSYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G13850.1 | 6e-11 | LBD family protein |