PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028100923.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 398aa    MW: 45970.5 Da    PI: 8.7054
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028100923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1241.2e-072358238
            FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCske 38
                    fYn+YAk  GFs+r+s+ +++ ++g++++r + Cs+e
  XP_028100923.1 23 FYNAYAKANGFSIRISSFNTN-KEGKVVSRLWLCSRE 58
                    9****************9998.66669999999**98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MVSDVKRVIL EQKFDSVEDR EAFYNAYAKA NGFSIRISSF NTNKEGKVVS RLWLCSREDV  60
GEWGKYVVAH FVADHNHELA EQHCVMYLRS HRSLNSVDKA QAMAMRNVGV KTSQIMDYMV  120
NQSGSYENVG FIHTDLHNHI QAERRAEVED GDAQKAMGNK APVSVLTDGD KAMREAIRRV  180
FPDARHRLCN WHVGKNDVSN VHKSGFAHAF KQCMDMETDE TKFEHGWTTI VEKFGLQTNS  240
WVLETHEKRH MLAEPYMRGH FFAGMKSTQR SESMNAYFSP FLQHKLKLYE FFRHYDRAFA  300
RIRYNEAGDD AETNNTFPKK GKLNVKDVFL LPDGQKCYYI HKYKVKDRSW IVTHSPVDAA  360
MRCSCMKFES LGLPCCPMIC VMKAKNLTQI PPTCVLHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-33FAR1 family protein