PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028100904.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 232aa MW: 25835.5 Da PI: 7.9337 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 82.8 | 2.2e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeEL vLCda+va+iifs tgkl++y+s XP_028100904.1 9 KKIDNITARQVTFSKRRRGLFKKAEELAVLCDADVALIIFSATGKLFDYAS 59 68***********************************************86 PP | |||||||
2 | K-box | 53.1 | 1.3e-18 | 89 | 171 | 16 | 98 |
K-box 16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + ++++a+L ke+++ +++R++ G+dL+ L+++eLqqLe+ Le++l+++ ++K e ++++i +lq k +l eenk+L++k+ XP_028100904.1 89 ENTNNHARLSKEVSEKTNQLRQMRGDDLQGLNIEELQQLERMLESGLSRVLKTKGERIMNEIATLQSKGAQLIEENKQLKQKM 171 4568899**************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MAREKIKIKK IDNITARQVT FSKRRRGLFK KAEELAVLCD ADVALIIFSA TGKLFDYASS 60 SMKDILRKYN VHANNSEKMD QPSLELQLEN TNNHARLSKE VSEKTNQLRQ MRGDDLQGLN 120 IEELQQLERM LESGLSRVLK TKGERIMNEI ATLQSKGAQL IEENKQLKQK MTMISKGKWG 180 VGVANVGAES DNLVPEEGQS PESITNGCSC NSAPPPEDDC SDTSLKLGLP IN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-101 | MIKC_MADS family protein |