PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028100808.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 171aa    MW: 19536.4 Da    PI: 9.6873
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028100808.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.81.4e-11794494
                    E-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3  4 vltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                    +l ++   +s+ l +p + +  +  +    e+ +++l   +g+ W++k    r + gr +++  W++F+k+n L ++D+v F+++  s  +l+v
  XP_028100808.1  7 ELFSNTDVTSN-LEIPQSAL--YlpDA--VEDNEIMLAWDHGKIWRFKAPLrRDGTGRRYMSCQWRQFAKDNSLMDRDVVKFYRST-SIVNLYV 94
                    55444444554.88998888..53344..46779***************66444444567899********************543.4444454 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MSAYEKELFS NTDVTSNLEI PQSALYLPDA VEDNEIMLAW DHGKIWRFKA PLRRDGTGRR  60
YMSCQWRQFA KDNSLMDRDV VKFYRSTSIV NLYVVSFERT LRGCSPLIYS EQEDWRLLVL  120
ISGSGNSIFL SIRPGRSRAG SRLSILFVAR ITLTSHLESK PSKVLPVPGS L