PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028100462.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WRKY
Protein Properties Length: 322aa    MW: 35693.6 Da    PI: 6.8496
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028100462.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY107.75.6e-34177234259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s+fprsYYrCt+++C+vkk+vers +dp++v++tYeg+Hnh+
  XP_028100462.1 177 EDGYRWRKYGQKAVKNSPFPRSYYRCTTQKCTVKKRVERSFQDPSTVITTYEGQHNHQ 234
                     8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MSDEPGGFYY HDPFHDDRYA TGATAFSFST STNSSLYNSP SHDLHGLGSS HMSFTESLHG  60
STDYNTIETA FGLSPPSSQL FSVVKEEQKP LVMDGGDTVV GVGETAVTPN SSISSSSTEA  120
GGDEDTSKSK KDRLQKEVED GGGESSKKVN KSKKKVEKIK REPRFAFMTK SEVDHLEDGY  180
RWRKYGQKAV KNSPFPRSYY RCTTQKCTVK KRVERSFQDP STVITTYEGQ HNHQIPATLR  240
GNAAGVMLPP SMLTMTPPLI AGTGFPQEFI VQMAPMYNHG GMSSFYPQSS NLTPLHHQQL  300
QHPDDYGLLQ DMFPSTFFKQ EP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.11e-59WRKY family protein