PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028100239.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 26226.7 Da PI: 10.6865 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35 | 3.6e-11 | 109 | 150 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ gt eAa+++++a+ XP_028100239.1 109 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQVEAARLYDRAAF 150 79**98..47*********4.....5**********99********985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MVSIRRRKLL GLCSGQRSFL SPLARFFDNG HVFESFIHNT KPVSVHPMPS VDAEQTKEKI 60 ISKVSPGASN ASGSSMSKEK HNQQHPVPEV KHRKRHRRKH FENQEPCLMR GVYFKNMKWQ 120 AAIKVDKKQI HLGTVGTQVE AARLYDRAAF MCGREPNFEL SEEEKQDLRQ FKWDEFLALT 180 RSAINNKKHR RRSGAGSRRK SKPSAQNSDW ELNQGVNGFS ASEDVEPDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 5e-44 | ERF family protein |