PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028100212.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YB | ||||||||
Protein Properties | Length: 154aa MW: 16947.2 Da PI: 8.624 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 176.4 | 2.8e-55 | 18 | 115 | 1 | 98 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vr+qdr+lPian+srimkk+lP+n+ki+kdak+tvqecvsefisf+t+easdkcq+ekrktingddll a+atlGfedy+++lkvyl++yreleg XP_028100212.1 18 VRNQDRYLPIANISRIMKKALPSNGKIAKDAKDTVQECVSEFISFITNEASDKCQKEKRKTINGDDLLCAMATLGFEDYIASLKVYLTRYRELEG 112 589******************************************************************************************** PP NF-YB 96 ekk 98 ++k XP_028100212.1 113 DTK 115 975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MADAPASPAG VQSPHSDVRN QDRYLPIANI SRIMKKALPS NGKIAKDAKD TVQECVSEFI 60 SFITNEASDK CQKEKRKTIN GDDLLCAMAT LGFEDYIASL KVYLTRYREL EGDTKGSARG 120 GDRSSERDIV GAQIDPNALA RRQRQIVSPI QCTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38880.2 | 5e-70 | NF-YB family protein |