PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028100211.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 155aa MW: 17021.1 Da PI: 7.3425 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 170.6 | 1.8e-53 | 18 | 112 | 1 | 95 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vr+qdr+lPian+srimkk+lP+n+ki+kdak+tvqecvsefisf+t+easdkcq+ekrktingddll a+atlGfedy+++lkvyl++yre ++ XP_028100211.1 18 VRNQDRYLPIANISRIMKKALPSNGKIAKDAKDTVQECVSEFISFITNEASDKCQKEKRKTINGDDLLCAMATLGFEDYIASLKVYLTRYREGDT 112 589****************************************************************************************9665 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 155 aa Download sequence |
MADAPASPAG VQSPHSDVRN QDRYLPIANI SRIMKKALPS NGKIAKDAKD TVQECVSEFI 60 SFITNEASDK CQKEKRKTIN GDDLLCAMAT LGFEDYIASL KVYLTRYREG DTKGSARGGD 120 RSSERDIVGA QIDPNALFAH QQSFTQGMNY LNSQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G38880.7 | 2e-68 | NF-YB family protein |