PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028100078.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 743aa MW: 84157.7 Da PI: 6.3101

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028100078.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	98.6	6.7e-31	87	178	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s+s++s+++g i++r fvC keg+r+ ++k+ +++ +r+r+ tr+gCka+l vk +++gkw+v+ ++ eHnHel+p XP_028100078.1 87 FYNSYARRVGFSTRVSSSRRSRKDGAIIQRSFVCAKEGFRNLNEKRtkDREIKRPRTITRVGCKASLSVKIQDSGKWVVSGFVREHNHELVP 178 9*************************************998888545677889*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 743 aa Download sequence
MENEVIEFDI GVGGGGGGGG AASGDEALDG DHHALDEEMA DSSPTGGSGG GGGGGGVSGE 60 IYIPEGDPDL EPYEGMEFES EEAAKAFYNS YARRVGFSTR VSSSRRSRKD GAIIQRSFVC 120 AKEGFRNLNE KRTKDREIKR PRTITRVGCK ASLSVKIQDS GKWVVSGFVR EHNHELVPPD 180 QVHCLRSHRQ ISGPAKTLID TLQAAGMGPR RIMSALIKEY GGISKVGFTE VDCRNYMRNN 240 RQRSLEGDIQ LLLDYLIQMH AENHSFFYSV QGDEDQYTGN VFWADPKARI NYTYFGDTVT 300 FDTTYRSNRY RLPFAPFTGV NHHGQPVLFG CALLINESEA SFVWLFKTWL TAMSGCPPVS 360 ITTDHDMVIR SAIMQVFPET RHRFCKWHIF KKCQEMLSHV FLKHPNFEAD FHKCVNLTDS 420 IEEFESCWLA LVDKYDLGVH EWLQTLYSAR RQWVPVYLRD TFFAEMSITQ RSDSMNSYFD 480 GYVNASTNLN QFFRLYEKAL ESRYEKEVKA DYDTINTSPV LKTPSPMEKQ ASELYTRKLF 540 VRFQEELVGT LTFMASKVED DGEVTMYQVA KFGEDHKAYY VKFNVLEMRA TCSCQMFEFS 600 GLLCRHILAI FRVTNLLTLP SHYILKRWTR NAKSTIILEE RASDAFSSYL ESHTVRYNTL 660 RHEAFKFVDE GAESLESYNV AMVALQEAAK RVALATQNEG KTPMVNGHVR EDLTSDGNQA 720 NYSTGDHPRS FSQQLSEGMS ILV

Sequence ? help Back to Top

Protein Sequence Length: 743 aa Download sequence

MENEVIEFDI GVGGGGGGGG AASGDEALDG DHHALDEEMA DSSPTGGSGG GGGGGGVSGE  60
IYIPEGDPDL EPYEGMEFES EEAAKAFYNS YARRVGFSTR VSSSRRSRKD GAIIQRSFVC  120
AKEGFRNLNE KRTKDREIKR PRTITRVGCK ASLSVKIQDS GKWVVSGFVR EHNHELVPPD  180
QVHCLRSHRQ ISGPAKTLID TLQAAGMGPR RIMSALIKEY GGISKVGFTE VDCRNYMRNN  240
RQRSLEGDIQ LLLDYLIQMH AENHSFFYSV QGDEDQYTGN VFWADPKARI NYTYFGDTVT  300
FDTTYRSNRY RLPFAPFTGV NHHGQPVLFG CALLINESEA SFVWLFKTWL TAMSGCPPVS  360
ITTDHDMVIR SAIMQVFPET RHRFCKWHIF KKCQEMLSHV FLKHPNFEAD FHKCVNLTDS  420
IEEFESCWLA LVDKYDLGVH EWLQTLYSAR RQWVPVYLRD TFFAEMSITQ RSDSMNSYFD  480
GYVNASTNLN QFFRLYEKAL ESRYEKEVKA DYDTINTSPV LKTPSPMEKQ ASELYTRKLF  540
VRFQEELVGT LTFMASKVED DGEVTMYQVA KFGEDHKAYY VKFNVLEMRA TCSCQMFEFS  600
GLLCRHILAI FRVTNLLTLP SHYILKRWTR NAKSTIILEE RASDAFSSYL ESHTVRYNTL  660
RHEAFKFVDE GAESLESYNV AMVALQEAAK RVALATQNEG KTPMVNGHVR EDLTSDGNQA  720
NYSTGDHPRS FSQQLSEGMS ILV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein